Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1413 ATGAAAACGTCAAACTCCATTTCTACCTCTCGATCGTCCCCATACCAGAGCTCAATCAACTCCAAGAACGGCAACTTTTTCCGACATCATAGATGGCGATGTTTTCAAGTACTATACAGATGGCTAGTGGAAGAAATCCTCTTGGGGAAAATCCGTTCCCATCATCAATCCCACTACCAGGAAGACACACTTCAAGGAAGAGGTCGACCGGATCATAGAATCCGTAAAAGACAGCACAAAAATCGTGGGCAACTATGGAAAAGAGCAGAGTGGCTTCATAAGGCAGCCGCAATACTGAAGGAGCATAAAGTACCCATTGCTGAGTGTCTCATCAAAGAGATTGCAAAGCCAGCTAAAGATGCCGTCACTGAAGTGATTTGGGGTCTTATTGTGCTGAAGGTGAGAATTCTTGTAGAAGGGAAATTTCTGGTTTCTGATAGTTTTCCAGGCAATGAAAGGACCAAATACTGTCTCACTTCCAAGATTCCACTAGGAGTTGTTATAGCTATTCCACCATTTAACTGTCCTGTCAATCTCGCTGTTTCAAAAATTGGTCCTGCCCTTATTGCTGCAAACTCCCTTGTACTTAAACCACCAACTCAGTTTCACTGGTGGAGACACTGGAATTACAACCTCAAAGAAGGATGGAATGATTCCTCTTCAAATGGAGCAGGGGGAAAAGACGCATTCATTGTTCTTGAAGATGCTGATTTGGATTTGGCAGCTGCTAACATTGTAAAAGGAGGCTTCTCTTACAGTTGTCAGAGTCCTCTGCTAACTTTATTGAAGGATTGGAAATGGACGCTAAGCAGAAAGGAGCAACATTCTGTCAAGAGTACAGAAGGGAAGAGAATCTCATATGGCAAGTTACTGTTGGATAATGTTCGTCCAGATATGAGGATAACATGGGAGGAGCCATTTGGTCCAGTCGTGCCAGTTGTTAGAATAAGTTCTGTTGATGAAGGAATCAACCATTGTAATTCTGGTAATTTGGCCTTCAGGTAG 1005 0.4299 MKTSNSISTSRSSPYQSSINSKNGNFFRHHRWRCFQVLYRWLVEEILLGKIRSHHQSHYQEDTLQGRGRPDHRIRKRQHKNRGQLWKRAEWLHKAAAILKEHKVPIAECLIKEIAKPAKDAVTEVIWGLIVLKVRILVEGKFLVSDSFPGNERTKYCLTSKIPLGVVIAIPPFNCPVNLAVSKIGPALIAANSLVLKPPTQFHWWRHWNYNLKEGWNDSSSNGAGGKDAFIVLEDADLDLAAANIVKGGFSYSCQSPLLTLLKDWKWTLSRKEQHSVKSTEGKRISYGKLLLDNVRPDMRITWEEPFGPVVPVVRISSVDEGINHCNSGNLAFR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1413 334 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 332 IPR016163 GO:0016620
Lele27g1413 334 MobiDBLite consensus disorder prediction 59 82 - -
Lele27g1413 334 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 205 IPR016162 GO:0016491
Lele27g1413 334 Coils Coil 334 334 - -
Lele27g1413 334 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 226 256 IPR016163 GO:0016620
Lele27g1413 334 Pfam Aldehyde dehydrogenase family 85 201 IPR015590 GO:0016491
Lele27g1413 334 Pfam Aldehyde dehydrogenase family 287 330 IPR015590 GO:0016491
Lele27g1413 334 SUPERFAMILY ALDH-like 85 329 IPR016161 GO:0016491
Lele27g1413 334 MobiDBLite consensus disorder prediction 1 20 - -
Lele27g1413 334 PANTHER ALDEHYDE DEHYDROGENASE 286 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1413 Lele-ChrLele27 20411509 20413776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1413 85 334 Aldehyde Dehydrogenase Gene Family AT2G24270 48.703 5.77e-88 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0676 25 4271153 4274883 Lele27g1413 27 20411509 20413776 hybridization
Lele26g0684 26 4362902 4366182 Lele27g1413 27 20411509 20413776 hybridization