Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1407 ATGGTGTTTAACTTTCGGGAGGGCGATCATCAAAGCCAGATAGCTAGCATTTTGTGTGACTATGACATGACTATAATGGAATATCCTCGACAGTATGAAGGTTGTCCGATACTCACTATGGAGACGATCCACCACTTCTTAAGATCAGGTGAAAGCTGGTTTCAACTTGGGCAAAACAATATTATCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCATTCATGCTGGCTGCTCTCTTGATTTATAGGAAGCAGTATACAGGCGAGCAAAGAACCTTAGAGATGATATATAAGCAAGCGCCTTGCGAACTTTTGCAGTTAATGTCCCCATTGAATCCTTTACCTTCACAATTGAGGTATCTTCAGTATGTATCAAGAAGAAATGTAGGTGCACAATGGCCTCCTCTAGATAGAGCACTTACATTGGATTGTGTTATTATGAGATTAATTCCTAATATGGATGGAGAGGGAGGTTGCTGTCCTATATTTAGAATATATGGACAGGACCCTTTTATGGCTGCTGATCGGACTCCCAAAGTTCTTTTTTCTACTCCAAAAAGGAGCAAAGTTGTCCGGCATTACAAGCAGGTGGATGACTGTGAACTTGTAAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGGAAATGATGTTTAGGGTCATGTTTAATACAGCTTTCATCCGATCGAATATTTTGATACTTAACCGTGATGAAATTGACACATTGTGGAATGGTAAAGACCAATTTCCGAAAGATTTTAGAGTAGAGATTCTTCTCTCAGATATGGATGCTGTTTCTTCTGTTATTTCCATTGATATGCCTCGGATTGAGGACAAAGAAGGCCTTCCTATTGAAGCATTTGCCAAGGTTCAAGAAATTTTCAGCAATGTTGATTGGTTAGACTCAAAAACAGAGGTAGTGAATGTGCTCCAGCAGATCACAGCATCAAATAAGCTCCAGGAAATATTAGACAGTGGAGTTTCTGCAACACCAAGCAACTTGCTAAAGGATTCATTGTCTGGAATATCTAAATTTGATCCAATAACACTGCCAGAAAATGATAACAAGGTTACTCCATCCTCAGGGCAGGGGAAGCAATTTATTTCCCCATTAGAACTCTCAACTGATTCAAATCTTACTAAAAAGATTATCTCATTGGGATCGAAGGCACCGCTGGAATATGATACTGAGAATCTTACAGTAATGGCTCAAGGGAATCGATCTCTTCCCTTAGAACTGCCCATAGGTGCAACCTTGATGAAAGAGAAGATAGAAAATGATGCCAAATGTATTACTTCATTGGTACAAGAGAAGGAACCTATTCTTTTAACTGACCCATCCATGGAAGCAAAATCAATGGGAAAAAAGATCGAACCATTAGAATTAAAAGCATTGCCGGAAAATGATACAAAGAGTCTCACATCCACAGCTCTGGCCAAACAATCTATTCTCTCACACAAGCCTTCTGATGATGCTAATTCTGTTAAAAAGAGGATAGAAACATCAGAAACAATGGCATTGTCCAAAGACAACAACAAGAGTCTCACACCCACAGCTCAGACCAAAGAATCTATTCCCTCATATGAACCTTCTGTTGATCCTAATTCTCTCAAAAGGAGGATTGAATCTCAACATTTGCAGGTTGCTCTTCAGTTGCCCACCCAATCCAAAATAATTTCTCCACGGGAGCGTCAAGCTTCTCAATCTGCTCCAGTTTTATATTGCAGTTCTTTACACGGTTCACATGTACCTATATCAAGATATCCTAGTGCACCGTCAGCCATCGGAATAACAGCTTTGTTGCAGGATCGTGCTGAAGGGGATATCAAGAAAGAAGTCAATCATGGAGTTACTATGGCCCCCTCTTCTTCTACATTGTCTCCTTCTGTCTTAGAGGTGCCCAAATCTGTAGACATAAGTCCTACAAGTCTTCCTCCAGTGTCATCTTCAAAATTGCTGCGATCTTTATCACAGAAATCTTTGATGGATGTTCCCGCAGTCACTCATAACACTGTTGCACCTCTTGGTCCTGCTGTTTCTTCTCCTTCTCCTCCTCAACCTCAGCCTACTTCAGAAATGATGCAACCTATTGTCACCCAGCACCCACAAAATATAGGACCTGATAAAACTAAAAGAGCATTGGTTTCTCCTACTCCTACACCTCAACCTAAATCTCAGCCTACTTCAGAATTGACGCAACCTGCTTTCACCCCACACCCTGAGAATATAGGGCATGACAAAGGTGAAAGGTCATTAGTTTCACCTCATCAACCTCAGCTTTCTTCAGAATTGATGCAACCTATTGTCTACCAGCAGCCTGAAAATACAACGCATGATAAAAGTAAAAAGTCATTAGTTTATCCTTCACCTCCGCCCCTACCTCCTAACTCAACTGTAGCTCCTCTTCTGTCATCTTCGTCCACAAAGATTTCATTGCCAACCCTTCCTCCGCCCACTCCACCACCTCCCACTGTAAAAAGTTCATTTGCATCTCCCCTTCTCCATCCCTCACTTCCTCACCCAACAACTGTTCCTCTTCCTGCATCTTCTATGAATAGCTCATTTTCACCCCCTCCTTCACCAGCTCTAGCCCCTCCACATTCCACTTCAGAAAATTCACTCAAAGCTCCCCTTCCTCCACCGCCACCTCCACCTCCATTTTCAATTTCTAAGACCTTTTCAATACCTCTCCCTCCACTCTCTGGGATTCCTTCTTCAGCTGCCCATTTTAATCCTTCTCCACTGAATATGAACAATTCTGCTGCTACCTCTGGCCCTCCACTCCCACCTCCACCTCCTGGGTATTCTGGAACCATATCCGGTCCTACTCTTACATCAACAGTGCCGCCGCCACCCCCACCACCTGCTTCTCCTACCACAACTTTGACAAAGAACTCTGCCACTGCTCCACCTGTACCTCCTCCTCCTTCTGCTAATGGGACTCTGCACCCTGGCACTGGTAATGGACATGTACCTCCAGCACCTGGACCGCCTAGCTTTCCATTTGGTGCAAAGGGACGTGGCTTGTCACGACTAGATGTAAAACAAACTAAAAGGAGTAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCACGGAAGTTTATGGGCTGAGACACAGAAACCTGAGGAAGCTTCTAAGTATGAGAACTGTGCTAAGCATTCTCTGGCTTTAGCTACTCCAAATTCTGATCGTGGAGGCAAAGGAGGACAATCCAATCGTCGTGGCTCAGGGACTAAAACTGAGAAAGTTCAACTGATCGAGCTAAGAAGGGCATATAATTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCAGATTTACTGAGCTTTGTGCTTGCTTTGGATGATTCAGCATTAGATGTCGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACGAAGGAAGAGATGGAACTACTCAGGAACTACACTGGAGATAAGGACAACTTAGGAAGGTGTGAACAGTTCTTCTTAGAATTGATGAAAGTTCCAAGAGTAGAAAGCAAGTTAAGAGTATTCTCTTTTAAGATACAATTCGGCACTCAGGTTTCTGAGCTTAGAAGGGACTTGAATATTGTAAACTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTTGGTAATGCTTTGAACCATGGAACTGCAAGAGGTGAGTTAAAGCTTATGCTTTTACCATCAAAAAGTGTGAGTGCTGCTATTGGGTTTCGATTGGATAGTCTCCTTAAGCTCACCGATACACGAGCCAGGAACAACAAAATGACACTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTCTCGAAAGACCTAGAGAGCTTGGAGGCTTCAACCAAGGTATCTCTTCCTATTGCATTATCAGAGGAAATGCAAGCTATTAGTAAAGGTCTTGAGAAAGTAGTTCAGGAATTGACTGTATCAGAGAATGATGGGCCCGTGTCAGAGAATTTCTGCAAGATTTTAAAGGAATTTCTTAGTGATGCTGAAGCCGAAGTGAGGTCTTTGGCTCAACTTTATTCAAATGTGGGTAGAAACGCGGATGCATTAGCTCAATACTTTGGAGAGGATCCTGCACGTTGCCCATTTGAACAAGTTGTATCCACCCTAATCAACTTTGTGAAGATGTTTGAACGAGCCCATGAAGATAACTGCAAGAAGCTTGAATTCAAGAAAAAGAAAGCAATGAAGGAAACAGAAAATGAGAAGTTGAAGTTAACTCCTAAAAAGGAGTCTGAACAAATGATACGAACCCCCATTGAGAGTGGCAAAATTAAGTGA 4392 0.4221 MVFNFREGDHQSQIASILCDYDMTIMEYPRQYEGCPILTMETIHHFLRSGESWFQLGQNNIILMHCERGGWPVLAFMLAALLIYRKQYTGEQRTLEMIYKQAPCELLQLMSPLNPLPSQLRYLQYVSRRNVGAQWPPLDRALTLDCVIMRLIPNMDGEGGCCPIFRIYGQDPFMAADRTPKVLFSTPKRSKVVRHYKQVDDCELVKIDIHCHVQGDVVLECISLDSDLEREEMMFRVMFNTAFIRSNILILNRDEIDTLWNGKDQFPKDFRVEILLSDMDAVSSVISIDMPRIEDKEGLPIEAFAKVQEIFSNVDWLDSKTEVVNVLQQITASNKLQEILDSGVSATPSNLLKDSLSGISKFDPITLPENDNKVTPSSGQGKQFISPLELSTDSNLTKKIISLGSKAPLEYDTENLTVMAQGNRSLPLELPIGATLMKEKIENDAKCITSLVQEKEPILLTDPSMEAKSMGKKIEPLELKALPENDTKSLTSTALAKQSILSHKPSDDANSVKKRIETSETMALSKDNNKSLTPTAQTKESIPSYEPSVDPNSLKRRIESQHLQVALQLPTQSKIISPRERQASQSAPVLYCSSLHGSHVPISRYPSAPSAIGITALLQDRAEGDIKKEVNHGVTMAPSSSTLSPSVLEVPKSVDISPTSLPPVSSSKLLRSLSQKSLMDVPAVTHNTVAPLGPAVSSPSPPQPQPTSEMMQPIVTQHPQNIGPDKTKRALVSPTPTPQPKSQPTSELTQPAFTPHPENIGHDKGERSLVSPHQPQLSSELMQPIVYQQPENTTHDKSKKSLVYPSPPPLPPNSTVAPLLSSSSTKISLPTLPPPTPPPPTVKSSFASPLLHPSLPHPTTVPLPASSMNSSFSPPPSPALAPPHSTSENSLKAPLPPPPPPPPFSISKTFSIPLPPLSGIPSSAAHFNPSPLNMNNSAATSGPPLPPPPPGYSGTISGPTLTSTVPPPPPPPASPTTTLTKNSATAPPVPPPPSANGTLHPGTGNGHVPPAPGPPSFPFGAKGRGLSRLDVKQTKRSNLKPYHWLKLTRVMHGSLWAETQKPEEASKYENCAKHSLALATPNSDRGGKGGQSNRRGSGTKTEKVQLIELRRAYNCEIMLTKVKIPLPDLLSFVLALDDSALDVDQVENLIKFCPTKEEMELLRNYTGDKDNLGRCEQFFLELMKVPRVESKLRVFSFKIQFGTQVSELRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGELKLMLLPSKSVSAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLESLEASTKVSLPIALSEEMQAISKGLEKVVQELTVSENDGPVSENFCKILKEFLSDAEAEVRSLAQLYSNVGRNADALAQYFGEDPARCPFEQVVSTLINFVKMFERAHEDNCKKLEFKKKKAMKETENEKLKLTPKKESEQMIRTPIESGKIK 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1407 1463 ProSiteProfiles C2 tensin-type domain profile. 139 279 IPR014020 -
Lele27g1407 1463 Gene3D - 136 282 - -
Lele27g1407 1463 PANTHER FORMIN-J 894 1450 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 732 753 - -
Lele27g1407 1463 Gene3D Protein tyrosine phosphatase superfamily 1 131 IPR029021 -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 709 723 - -
Lele27g1407 1463 Coils Coil 1415 1435 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 522 548 - -
Lele27g1407 1463 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 127 IPR029021 -
Lele27g1407 1463 SMART it6_source 1029 1461 IPR015425 -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 1077 1101 - -
Lele27g1407 1463 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1029 1440 IPR015425 -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 962 976 - -
Lele27g1407 1463 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1042 1432 - -
Lele27g1407 1463 Pfam C2 domain of PTEN tumour-suppressor protein 140 277 IPR014020 -
Lele27g1407 1463 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 141 279 IPR035892 -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 923 940 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 520 552 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 1434 1454 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 792 1034 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 1434 1463 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 1085 1100 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 892 909 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 689 776 - -
Lele27g1407 1463 MobiDBLite consensus disorder prediction 830 844 - -
Lele27g1407 1463 SMART PTEN_C2_2 137 278 IPR014020 -
Lele27g1407 1463 Pfam Formin Homology 2 Domain 1033 1415 IPR015425 -
Lele27g1407 1463 Gene3D Formin, FH2 domain 1048 1454 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1407 Lele-ChrLele27 20357325 20364950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1407 539 629 FH2 protein (formin) Gene Family AT2G25050 39.130 4.73e-09 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0683 25 4318386 4326138 Lele27g1407 27 20357325 20364950 hybridization
Lele26g0688 26 4399727 4406749 Lele27g1407 27 20357325 20364950 hybridization