Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1395 ATGGGAATATATCTAAGCACTCCCAAAACTGAGAAGTTTTCCGAAGATGGTGAGAATGACCATCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCAGATCTTGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGGCATGGAGGTAAGGTTGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAAGTTCTCAAAAGCGAAGCATATACAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCTTTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCTGTCTTAGGTGATAAGATAAACAAGTTTACTGGGATGATAGAAGGACTGATTTGGTCTCCTCGAAGCAGTGACGGTAATGACCAGGTTGATGATTGGGCTTTTGAGGAGGGACCGCATTCTGATTTTGCTGGGCCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATTAGAAACAACCTACTTGTTGTTGCAAATGCTGGGGATTCAAGATGCGTGATATCCAGGAAGGGTCAGGCGTACAATTTATCTAGGGACCACAAACCTGAACTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGGCGAGTTAATGGCAGTTTAAATCTTGCAAGGGCTATAGGTGACATGGAATTTAAACAAAATAAATTTCTGCCTGCTGATAAACAAATTGTGACTGCCAATCCCGATGTAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTTTAGTGGTAGCATGTGATGGAATATGGGATTGTTTGTCAAGCCAGCAATTGGTAGATTATGTGCATGAACAACTGGTATCGGAAACGAAACTCTCAACCGTATGCGAGAGAGTACTTGATCGGTGTTTGGCACCATCAACTGTTGGAGGTGAGGGATGTGATAACATGACAATGATCTTGGTGCAATTCAAGAAACCCACCCGGTCTACTGAAGAAGCAGCAGAGCAATCCACTTCAAACGAACAAGCTGAATCTGAACCAAAACCAGAGGAAAGCCAAATCTAA 1083 0.4275 MGIYLSTPKTEKFSEDGENDHLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYTAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNLLVVANAGDSRCVISRKGQAYNLSRDHKPELEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPADKQIVTANPDVNTVELCDEDEFLVVACDGIWDCLSSQQLVDYVHEQLVSETKLSTVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTRSTEEAAEQSTSNEQAESEPKPEESQI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1395 360 MobiDBLite consensus disorder prediction 331 360 - -
Lele27g1395 360 CDD PP2Cc 23 329 IPR001932 -
Lele27g1395 360 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Lele27g1395 360 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Lele27g1395 360 PANTHER PROTEIN PHOSPHATASE 2C 20 328 IPR015655 GO:0004722|GO:0006470
Lele27g1395 360 SMART PP2C_4 12 327 IPR001932 -
Lele27g1395 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Lele27g1395 360 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Lele27g1395 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lele27g1395 360 Gene3D - 1 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1395 Lele-ChrLele27 20295121 20299906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1395 1 338 PP2C-type Phosphatase Gene Family AT2G25070 79.586 0.0 590