Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1380 ATGACGATGAAGAAGCTGATCGTCTTGTTTATGTGGGCTTTATGTTGTTCCCTGAGCAGCATGGCACAGAGAAACGAAAGCGTCCCAGTAAAAGTAGGAATCTTACTCGATCTTTCTTCTCCGGCCGCAAAGATGGGCTTGAGCTGCATCAACATGTCCCTCTCTGACTTTTACGCCTCTCATTCTGATTATAGAACCAAGCTCGTCTTCACCGTCAGGGACTCCCACTCAGACGTTGTTTCTGCAGCTTCTCAAGCTCTAGATCTCATAAAATCAGAGAAAGTGGAAGCCATAATAGGTCCATTCACATCAATGGAGGCCATCTTTTTGATCAGTTTAGGAGACAAAGCTCGTGTTCCCATCATAACCTTTTCAGCAACAAGCCCTTCTCTGGCTTCCCTTCCAAGTTCATATTTTTTTCGTATCGCACAAACCGATTCAGCTCAGGTGAACGCCATTGGTGCAATCGTAGAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACGTAGAGAACGAGTATGGGAAAGGGGTCTTACCCTACTTGACTAATGCCCTTCAACAAGTATACGTTCGAATCCCATATCAGAGTTCTATTTCACCTTCAGCCACTGATGAAGATATCAGGGCAGAGCTCTACAAGTTGATGACCATGCAAACCAGAGTGTTTGTTGTTCACATGAACCCCAATCCAGGAGTGCGACTCTTCACCATTGCAAAACAGATTGGAATGATGAGCAACGGCTACGTTTGGATAGTAACAGATGGTCTGGCTAATGGATTAAGCTCTTTGAATTCCTCAGTCATAGAATCAATGGAAGGAGTGTTGGGTGTTAGGACTTATATTCCCAAAACAGAGAAGTTAAATGACTTTAAAGTTCGATGGAAAAGAAGATTCCTACAAGAAAATCCTACCCTTGTTGATACTGATTTGAATGTTTTTGGAGTATGGGCTTACGATGGTGCCACAGCATTAGCTATGGCTATTGAGAAGGTTGATACCAACAATCTTGGGTTTGATATGAGCAATGCTTCGTCCAATTCAACTGATTTGGAAAAGATTGGAGTTTCAAAAAGTGGTGAAAAGCTCCGTGAAGCCTTATCAAACATTACATTTACGGGCCTAAGTGGAGAATTCAGCATTGTTAACAGGCAATTGCAAGCTTCGACGTTTGAGATATTGAATGTGATTGGGAATGGAGGAAGAACGATTGGGTTTTGGACACCACAAAACGGAATAGTCAGAAATCTTGACTCAACTAACGACACCGAAATGCATTATTCTACATCAAGTAAGGATCTTGGTTCAACTATATGGCCAGGGGATACGAACTCTGTTCCAAAGGGATGGGAAATTCCAACTAATGCGAGGAAGTTAAGGATAGTTGTGCCTGTGAAAAATGGTTATCCTGAATTCGTGAAAGTATCTCATGACCCCATCACTAATACAACAGAGGTCACTGGATTTTGCATTGATGTGTTCAAAGCAGTTTTGGAAGTTCTCCCTTATGGCTTACCCTATGAATTCATCCCTTTTGCCAAACCAAATGGTGACAGTGCAGGATCGTACAATAATCTGATCAGCCAAGTTTATTTTGGGAACTTTGATGCCGTGGTGGGGGATGTAACAATTATAGCAAACAGGTCTAATTATGTGGATTTCACTTTGCCCTACACAGAATCTGGTGTAACAATGGTAGTTCCAGTGAAAGACGATAGGAAGAAGAATGCATGGGCCTTCTTAAAGCCATTGACTTGGGATCTCTGGGTAACAATAGCTTGTTTCTTTGTATTCGTTGGGTTTGTTGTGTGGGTGCTTGAACACCGAATCAACGAACATTTCAGAGGGCCCCCATCGCACCAGATTGGAACATCCTTATGGTTTTCATTCTCGACCATGGTTTTTGCGCATCGAGAAAAAGTGGTGAGCAACTTGAGCAGATTTGTGGTGATTATATGGGTTTTTGTGGTTCTAATTCTGGTTCAGAGCTACACTGCTAGTCTGACAGCCCTTTTGACGGTTGAGCAGCTCAACCCAACTGTAACTGACGTTAATGTACTTATAAAGAAGAGAATGAACGTTGGTTACAAGAAAGGTTCGTTTATGCGTGAAATCTTGGAGGAAATGGGTTTCCTCGATCACCAATTCAAAACATATAAATCCACAGAGGAATGTAACGAACTCTTTGCAAGAGGAAGTGCAAACGGTGGCATTGCGGCAGCATTTGATGAAGTGCCATACGTCGTCAAAGTCTTCCTCCAAAGTTATTGTTCTAAGTATGCCATGGTTGAGCCAACTTTCAAAACTGGTGGCTTTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGATATATCAAGGGCAATCCTGCATGTTACACAAGGAGACAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAAAAAACAAGTGTCCAGATTCAGATACCTCAATTTCATCAAACAGTCTAGGACTTGAAAGCTTCTGGGGACTATTTCTCATGGTAGGGGTTGCTTCTGCTCTGGCTTTAATTGTCTTCGCAGTTAACTTCCTATATCAGCACAAGCAAATCTGGTTACAGAATGATCCCAATACCTCAAAGTGGAGACGAATTGGGAAGTTGGTAAAGAAGTTTGATCAGAAGGACCTGAGTTCTCACGCATTCAGAAAAAGGGAAATGCAAAATAATAAGAATGAAAATTATAGCAGACATGATATTTGTGAAGTGGAGGCATCTCCACGTACAAACTGCCCTCCAAGTCCATCTTTACAATCTGAATCAGAATCAAGTTTCTCATTTTATAGTGAGGCTAGCCCAAATAGGCCTGCACCACTACAAGACACAGAAATAACCTTAGTGCATGCTGTAATGTAG 2877 0.4209 MTMKKLIVLFMWALCCSLSSMAQRNESVPVKVGILLDLSSPAAKMGLSCINMSLSDFYASHSDYRTKLVFTVRDSHSDVVSAASQALDLIKSEKVEAIIGPFTSMEAIFLISLGDKARVPIITFSATSPSLASLPSSYFFRIAQTDSAQVNAIGAIVEAFGWKEAVPIYVENEYGKGVLPYLTNALQQVYVRIPYQSSISPSATDEDIRAELYKLMTMQTRVFVVHMNPNPGVRLFTIAKQIGMMSNGYVWIVTDGLANGLSSLNSSVIESMEGVLGVRTYIPKTEKLNDFKVRWKRRFLQENPTLVDTDLNVFGVWAYDGATALAMAIEKVDTNNLGFDMSNASSNSTDLEKIGVSKSGEKLREALSNITFTGLSGEFSIVNRQLQASTFEILNVIGNGGRTIGFWTPQNGIVRNLDSTNDTEMHYSTSSKDLGSTIWPGDTNSVPKGWEIPTNARKLRIVVPVKNGYPEFVKVSHDPITNTTEVTGFCIDVFKAVLEVLPYGLPYEFIPFAKPNGDSAGSYNNLISQVYFGNFDAVVGDVTIIANRSNYVDFTLPYTESGVTMVVPVKDDRKKNAWAFLKPLTWDLWVTIACFFVFVGFVVWVLEHRINEHFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNLSRFVVIIWVFVVLILVQSYTASLTALLTVEQLNPTVTDVNVLIKKRMNVGYKKGSFMREILEEMGFLDHQFKTYKSTEECNELFARGSANGGIAAAFDEVPYVVKVFLQSYCSKYAMVEPTFKTGGFGFVFPKGSPLVADISRAILHVTQGDKMKVIENAWFRKNKCPDSDTSISSNSLGLESFWGLFLMVGVASALALIVFAVNFLYQHKQIWLQNDPNTSKWRRIGKLVKKFDQKDLSSHAFRKREMQNNKNENYSRHDICEVEASPRTNCPPSPSLQSESESSFSFYSEASPNRPAPLQDTEITLVHAVM 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1380 958 FunFam Glutamate receptor 577 707 - -
Lele27g1380 958 Pfam Bacterial extracellular solute-binding proteins, family 3 483 808 IPR001638 -
Lele27g1380 958 FunFam Glutamate receptor 320 457 - -
Lele27g1380 958 SUPERFAMILY Periplasmic binding protein-like I 29 413 IPR028082 -
Lele27g1380 958 FunFam Glutamate receptor 458 577 - -
Lele27g1380 958 FunFam Glutamate receptor 151 309 - -
Lele27g1380 958 Gene3D - 754 814 - -
Lele27g1380 958 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Lele27g1380 958 Pfam Receptor family ligand binding region 49 398 IPR001828 -
Lele27g1380 958 Gene3D - 577 709 - -
Lele27g1380 958 Gene3D - 151 311 - -
Lele27g1380 958 CDD PBP1_GABAb_receptor_plant 31 417 IPR044440 -
Lele27g1380 958 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 891 - -
Lele27g1380 958 SUPERFAMILY Periplasmic binding protein-like II 437 810 - -
Lele27g1380 958 Gene3D - 340 458 - -
Lele27g1380 958 CDD GluR_Plant 457 807 - -
Lele27g1380 958 PIRSF IGluLR_plant 1 944 IPR017103 -
Lele27g1380 958 SMART GluR_14 458 809 IPR001320 GO:0015276|GO:0016020
Lele27g1380 958 FunFam Glutamate receptor 2.7 714 814 - -
Lele27g1380 958 Gene3D - 64 150 - -
Lele27g1380 958 Gene3D - 459 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1380 Lele-ChrLele27 20224396 20227799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1380 8 929 Ion Channels AT2G29120 53.175 0.0 961