Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1379 ATGATCAAGAAGCTCGGGAACCATCTGCTCTGCCTTATCTGGACTCTTACTTGTTTCCTGTGCGTAGCAGAAGCTCAGACAAACGCGACTGTGCCGGTGAAAGTAGGAATCGTACTTGATCTTTCGTCTACCACCGCAAAGATGGGATTGAGCTGCATCAACATGTCCCTCTCTGACTTTTATGTCTCTCGTTCTCATTACAAAACCAGGCTTGTCTTGACCGTCAGGGACTCCCAAAGAGACATCGTTACTGCTGCTGCTCGAGCAATAGATCTCATCAAAACAGAGCAAGTGCAAGCAATAATAGGACCATCAACATCAATGGAGGCCAACTTTGTGATCAGTCTCGGAGCCGAAGCTCATGTGCCCATCTTAACCTTCTCTGCAACCAGTCCTTCTCTTACTTCTCTTGGGAGCCCATACTTCTTTCAGATTGCACAGAACGATTCGGCTCAAGTGAATGCCATTAACGCAATCGTGCAAGCTTTTGGGTGGAAAGAGGCTGTGCCCATTTACGTCGACAACGATTATGGGAAAGGGGTCATACCCTTCTTGACTAATGCTCTTCAACAAGGGTATGTTCGAATCCCATATATGAGTGCCATTTCACCTTTAGCCACGGACGAAGAAATCAAAACAGAGCTCTACAAGTTAATGGCCAACCAAACCAGAGTGTTCGTTGTGCACGTGTCCTCAAATATTGGCTCTCGTCTCTTCTCCATAGCAAAACAGATCGGTATGATGAGCAAAGGCTATGTTTGGATCGTAACCGATGGTTTGGGTAATGTGCTGAATTCCTTCGACTCCCCAGTCATAGAATCAATGCAAGGAGTATTGGGTGTTAAGAGTTATGTTTCCAAAACCAAAAAACTGGATGATTTTGATGTCAGATGGAAAAGGAAGTTCATACGAGACAGTCCAACCCTTGCTGGCATAAATCTGAATGTGTTTGGATTATGGGCTTACGATGCTACGAAGGCTTTAGCCAAGGCTGTTGAGCAAGTCGGCGCCAGCAATCTTGGCTTCGATACGAGTAACGCTTCAGGCAAATCTTCCGATCTTGAAAGCTTGGGAGTTTCACGAAATGGGGAAAAGCTGCGTGAAGCCATATCCAGAATCAGATTTAGAGGTCTGAGTGGAGAGTTCAATGTTGTTAATGGACAACTGCCGGCATCAACGTTTGAGATTGTAAATGTGATTGGTAATGGGCAAAGAACTATAGGATTTTGGACATCACAAAACGGACTTGTTCGAAATTTGAGTTCGATGAACACAAGAACGTATTCTACATCAGAGAAGAATCTAGCTAAAGTAATATGGCCAGGGGATACAAACTCTGTTCCAAGCGGTTGGGAAATCCCTTTAAAAGGAACAAAGTTGAGAGTAGGCGTACCAGTGAAAGCGGGTTTCAAAGAATTCGTGAAGGCAACACTTAATCCAACCACAAATCAAACAGAAATCACAGGATTCTGCATCGACATGTTCAAGGCTGTGGTGCAAGCATTGCCGTATGCTCTGCCATATGATTTCATCCCATTTCCTAAGATGGAAGCTGTGATTAGTACAACTCCAATATACGACGATCTTATCAGCCAAGTATATTTTGGGAACTTTGATGCCGTGGTGGGAGATGTGACGATCATAGCAAACAGATCGAACTATGTGGATTTCACTCTTCCGTACACTGAATCTGGGGTAACAATGATAGTTCCGGTGAAAGATAAGAGGAAGAAGAACGTGTGGGCCTTCTTGAAGCCATTGACTTGGGATCTTTGGGTGACAACTACTTGTTCCTTTGTATTTATTGGGTTCGTCGTGTGGGTGCTTGAACACCGAACAAACGATCATTTCAGAGGACCTCCGTCACATCAAATCGGCACCAGCTTATGGTTTTCTTTCTCCATCATGGTTTTTGCCCATCGAGAGAGAGTGGTGAGCAACTTGAGTAGATTTGTGGTGATCATATGGATGTTTGTAGTTCTAATTCTGATTCAGAGTTATACTGCAAGTTTGACGTCGCTCTTGACAGTTGAACAGCTTAGCCCAACTGTGAAGGACGTGAATCTACTGATAAAGAATAGATTGAATGTTGGTTATTTGGAAGGTTCCTTTGTATACGAAGTTCTGAAGGACATTGGTTTCCAAGAGTACCAACTCAAAATTTATAATTCCACTGAAAGCTGCCATGAATTATTCGAAAGAGGAACTGAGAAGGGTGGGATTGCTGCCGCGTTTGATGAAATTCCATATGTTAAACTCTTTCTCGGGAATTATTGCTCCAAGTACACCACGGTTGATCCGACTTTCAAAACTGGGGGCTTTGGCTTTGTTTTCTCAAAAGGTTCTCCTCTTGTAGCCGACATATCAAGAGCAATATTGAACGTGACACAAGGGGATAAAATGAAAACAATAGAGAGTGAATGGTGGAATGGAAAAAATTGTCCAGATTACGAAGCCTTAGATTCTTCAAATAGCCTTGGCCTTGAGAGCTTCTGGGGCTTATTTCTGATTGCAGGACTTGCTTCCATATTTGCACTCATCATCTTCGCGGTCACATTCCTACACCAGAACAGACACGTCTGGTCACGCTACAATCCCAGTACATCAATATGGAGGCGAATAAAGATGTTGCTGAGGAGTTATGACCAAAGAGACGAGAGCTCTCACATTTTCAAGAAGAAGGAAAATAGAAGCGAAGGTACAAATACTCATCATGGGTTGGGTTCAGTTGAGGCGTCTCCAACATCACAGTGTCCCCCAAGTCCATCAAGTGAGGGTGAATCTGACTTTTCCTTTAATGGAGAAGGTGCAGTGTTTTCTCAAGAGTTTGGTGGTGAGGCTAATCCAAATGCATATCTGCCTCAGAACTTGGAAATAACCGTCTGCCATTGGATACAGCCTGCTTAA 2907 0.4369 MIKKLGNHLLCLIWTLTCFLCVAEAQTNATVPVKVGIVLDLSSTTAKMGLSCINMSLSDFYVSRSHYKTRLVLTVRDSQRDIVTAAARAIDLIKTEQVQAIIGPSTSMEANFVISLGAEAHVPILTFSATSPSLTSLGSPYFFQIAQNDSAQVNAINAIVQAFGWKEAVPIYVDNDYGKGVIPFLTNALQQGYVRIPYMSAISPLATDEEIKTELYKLMANQTRVFVVHVSSNIGSRLFSIAKQIGMMSKGYVWIVTDGLGNVLNSFDSPVIESMQGVLGVKSYVSKTKKLDDFDVRWKRKFIRDSPTLAGINLNVFGLWAYDATKALAKAVEQVGASNLGFDTSNASGKSSDLESLGVSRNGEKLREAISRIRFRGLSGEFNVVNGQLPASTFEIVNVIGNGQRTIGFWTSQNGLVRNLSSMNTRTYSTSEKNLAKVIWPGDTNSVPSGWEIPLKGTKLRVGVPVKAGFKEFVKATLNPTTNQTEITGFCIDMFKAVVQALPYALPYDFIPFPKMEAVISTTPIYDDLISQVYFGNFDAVVGDVTIIANRSNYVDFTLPYTESGVTMIVPVKDKRKKNVWAFLKPLTWDLWVTTTCSFVFIGFVVWVLEHRTNDHFRGPPSHQIGTSLWFSFSIMVFAHRERVVSNLSRFVVIIWMFVVLILIQSYTASLTSLLTVEQLSPTVKDVNLLIKNRLNVGYLEGSFVYEVLKDIGFQEYQLKIYNSTESCHELFERGTEKGGIAAAFDEIPYVKLFLGNYCSKYTTVDPTFKTGGFGFVFSKGSPLVADISRAILNVTQGDKMKTIESEWWNGKNCPDYEALDSSNSLGLESFWGLFLIAGLASIFALIIFAVTFLHQNRHVWSRYNPSTSIWRRIKMLLRSYDQRDESSHIFKKKENRSEGTNTHHGLGSVEASPTSQCPPSPSSEGESDFSFNGEGAVFSQEFGGEANPNAYLPQNLEITVCHWIQPA 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1379 968 Gene3D - 580 711 - -
Lele27g1379 968 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Lele27g1379 968 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 888 - -
Lele27g1379 968 Gene3D - 759 816 - -
Lele27g1379 968 SUPERFAMILY Periplasmic binding protein-like I 33 452 IPR028082 -
Lele27g1379 968 FunFam Glutamate receptor 323 458 - -
Lele27g1379 968 Pfam Bacterial extracellular solute-binding proteins, family 3 483 809 IPR001638 -
Lele27g1379 968 Pfam Receptor family ligand binding region 53 401 IPR001828 -
Lele27g1379 968 PIRSF IGluLR_plant 3 937 IPR017103 -
Lele27g1379 968 CDD GluR_Plant 459 808 - -
Lele27g1379 968 Gene3D - 460 579 - -
Lele27g1379 968 MobiDBLite consensus disorder prediction 889 931 - -
Lele27g1379 968 FunFam Glutamate receptor 459 580 - -
Lele27g1379 968 MobiDBLite consensus disorder prediction 902 930 - -
Lele27g1379 968 FunFam Glutamate receptor 152 311 - -
Lele27g1379 968 FunFam Glutamate receptor 580 710 - -
Lele27g1379 968 Gene3D - 150 313 - -
Lele27g1379 968 CDD PBP1_GABAb_receptor_plant 34 420 IPR044440 -
Lele27g1379 968 SUPERFAMILY Periplasmic binding protein-like II 436 811 - -
Lele27g1379 968 SMART GluR_14 459 811 IPR001320 GO:0015276|GO:0016020
Lele27g1379 968 Gene3D - 360 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1379 Lele-ChrLele27 20215717 20219134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1379 3 927 Ion Channels AT2G29120 50.591 0.0 909