Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1378 ATGCGTTCCGAGGACCTCCCTCACATCATATTGGCACCAGCTTATGGGGAGAAAATAGTGAGCAACTGTGCTAGATTTGTGGTGACAGTGTGGATCTTCGTTGTTCTAATTTTGATCCAAAGCTACACGGCGAGCTTGAATGTGGGCTACCACCTGGTGTTCCCTAAAGGGTCTCCTCTAGTAGCAGACATTTCAAGAGGAATCCGAAATGTGACTCAGGGAGATAAAATGAAAACAATAAAGAGCGCATGGTTCAAGAGAAGTTATTGTCCAGATAAGGACGCTTCAGTTTCTTCTGATAATCTAAGCCTTGATAGTTTCTGGGGTCTCTTCTTCATTGCAGGGCTTGGTTCAGTTTCAGCTCTCACCACATTTGCAGTCACATTCCTACATCAGCAGAAGCATATATGGCGCCCCAATCCATCTAACTCTAATTCGTCATCATCATCAATAATGGAAACGCATCAGTGCGTTGCTTAA 480 0.4417 MRSEDLPHIILAPAYGEKIVSNCARFVVTVWIFVVLILIQSYTASLNVGYHLVFPKGSPLVADISRGIRNVTQGDKMKTIKSAWFKRSYCPDKDASVSSDNLSLDSFWGLFFIAGLGSVSALTTFAVTFLHQQKHIWRPNPSNSNSSSSSIMETHQCVA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1378 159 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 48 142 - -
Lele27g1378 159 Pfam Ligand-gated ion channel 16 117 IPR001320 GO:0015276|GO:0016020
Lele27g1378 159 Gene3D - 10 97 - -
Lele27g1378 159 MobiDBLite consensus disorder prediction 140 159 - -
Lele27g1378 159 SUPERFAMILY Periplasmic binding protein-like II 46 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1378 Lele-ChrLele27 20212216 20213122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1378 49 138 Ion Channels AT2G29110 47.000 5.19e-25 98.2