Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1377 ATGGTTTGCGAGATGGAACATGACCTTATGGAGGACATGGACATAGAAGTCCTGCCTTCAATGTGGCCAGAAGATATTGGAACTGATGCAGGGAAACAGTTTAACATAGAGAAGCCTGGAATTGACCAAGACATGTTAGAGGAGGTAACAATAGTGGAGGAGCCAACCATAGTAGATTTCAAGCGTCTCATGGAGCTCACCAACCAAACAGACAGAGGCTCGTCTCAGTTGACATATTTCATGAAATACTTGGAGTACAGGCAGGCTAATGCGGTGCGTCTCCTACGAGAAGAACTCGACAACCTAAGTAAACAGAGACAGGAGGTTGAGCTGAGGAAGTTAAAGATATTGGAAGAGCATCGGTTTGTGGATATAAGATATGGGGAGGACAAACGACCAGTTTCTATATTGGATGAAGTTTATGACATATGGCAAGATATACCTCGTAGGAAAAATGAACTTGTTGTTCAGAACAAGGGTATTGAAATAGATGTTGAGGATGATACTGTAGTATACTGGAAGCAGAGGGCACTGCATTTGGAAAAACTGTTGGAAGCGAGTATTCAGAGAGAGCAGACACTTATGGAGAAGCTGGAAGAAAGCATAAAGAAGCTTGAAAAGCAGTCCTGTCCTGTAGAAGAATTGTCCCAGATTCTTAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGTCATCAGGACACAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGTTTGCAAGAGGAGGACATCATAGGAAGAACAGATGTGGAAATTTTCAAGGGGTCTGGAGTTAAGGAATCTCAAGATTTTAAGAGAGAAGTTCTGCAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTTGGGTCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAGGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCCCAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAACAAAACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCTCCACTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTACAACAAAGCTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATTAATGACATATTAGATCTTTCCAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCTACCAAATTCCGTCCAAGAGAGGTAGTAAAGCATGTGCTTCAGACTGCTGCAGCATCACTGCAGAAAATATTAACCCTACAAGGTCATGTGGCAGATGATGTTCCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATCTGATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTGTACGTTGTAGCAGAGCCCAACTTCGGAAAATCGGAAGAAGGTCTCCAAAAGATGAGTGGAGACAAGTTAAATGTATCAGTGAGTGGATTGACAGAAGAGAAATACTTCTCAGCGTCTCAAAATGGGAGTGAAGAATGTAGATCTCCTGTAAAAAGCGAATGCTCAAGGAATGGGGATACAGAGGAACAACCTCATTCAACTGAAATTACAGTGTGGATACGTTGTGATGTATACGACACTGGAATTGGAATACCAGAAAAAGCAATTCCCACTTTATTTAAAAGGTATATGCAAGTCAGTGCAGACCACGCTCGAAAGTATGGTGGCACAGGGCTGGGATTAGCAATATGCAAACAACTGGTCGAATTAATGGGTGGTCGTCTAACGGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCCTACAAGGTTTCTACCGCCTGTGATCATTCAGATGACCCTGACGAGCTCTCAGATATGGAGAACGACGATGCTGCGTCTGATGATGCCACGCAAGGATTCTTCCAATTCCAACCACGTACATTGGGCTCACTTTTCTCGTCCAACGGATCTGCCAGAGCCCCAAAGTTGTTACCCCATAGACGTGGGCTCACAATCCCCCATAACTTCAATGAGTTTTCGCAGAATTCTTACGAAATCTCTTCATATGGAAGAACTTCAGCAGAAGATGCAATCCGAGTGACAGTAACGGACGCGCCAGAGATGTCTGGATCAGGAAGTTCAATGACGCAAAAGCCAGAAACAGAGAACGAAAATGTAGTTAGCAGAGACAAGCATCGTCAAGATAAAACATGCGCTCAACTCCCGAATGGTATTTCAAGAAGAGAAATTGGTGTGGGAACAAAGTCAAGCAGAACCCAGCAATCAAGTGAGACTCAAGAGAAGGATAACAGAACTTCCCAATGTGTTACCAGCAGAAGTAATAATACTACATCAGCAGTGGAGGACAAAGCCCCATCAGAGGCTAAGATCCTTCTGGTTGAAGATAACAACGTCAACGTTATGGTGGCACTCTCGATGATGAAGCAGTTAGGTCACAGCATAGATGTGGTGAACAATGGAGTGGAAGCTGTGCGTCAAGTTCAGCGCCGGAGCTATGACCTCATTCTAATGGATATGTTCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTAATTCGCTCTTTTGAGGAAACTGGAAATTGGGATGCTGCAACAAAAGCTGGAATAGAGCCAAGCATTTCAACTTCAGATTTGCAGAAACCTAAATGTTGTCTGCCTTCCACAAAGCGAATGGCCATTATCGCGATGACGGCAAATGCTTCATTAGAGAGTGCGGAGGAGTGTTATGCAAATGGAATGGACTCATTTGTGTCTAAACCTGTGACTTTCCAGAAATTGAAGGGGTGCCTAGAACAATTCCTACGGTGA 2979 0.4267 MVCEMEHDLMEDMDIEVLPSMWPEDIGTDAGKQFNIEKPGIDQDMLEEVTIVEEPTIVDFKRLMELTNQTDRGSSQLTYFMKYLEYRQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFVDIRYGEDKRPVSILDEVYDIWQDIPRRKNELVVQNKGIEIDVEDDTVVYWKQRALHLEKLLEASIQREQTLMEKLEESIKKLEKQSCPVEELSQILKRADNFLHFILQNAPVVIGHQDTELRYRFIYNHFPSLQEEDIIGRTDVEIFKGSGVKESQDFKREVLQKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLQGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVAEPNFGKSEEGLQKMSGDKLNVSVSGLTEEKYFSASQNGSEECRSPVKSECSRNGDTEEQPHSTEITVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSTACDHSDDPDELSDMENDDAASDDATQGFFQFQPRTLGSLFSSNGSARAPKLLPHRRGLTIPHNFNEFSQNSYEISSYGRTSAEDAIRVTVTDAPEMSGSGSSMTQKPETENENVVSRDKHRQDKTCAQLPNGISRREIGVGTKSSRTQQSSETQEKDNRTSQCVTSRSNNTTSAVEDKAPSEAKILLVEDNNVNVMVALSMMKQLGHSIDVVNNGVEAVRQVQRRSYDLILMDMFMPVMNGLEATKLIRSFEETGNWDAATKAGIEPSISTSDLQKPKCCLPSTKRMAIIAMTANASLESAEECYANGMDSFVSKPVTFQKLKGCLEQFLR 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1377 992 PRINTS Bacterial sensor protein C-terminal signature 584 598 IPR004358 GO:0016310|GO:0016772
Lele27g1377 992 PRINTS Bacterial sensor protein C-terminal signature 619 637 IPR004358 GO:0016310|GO:0016772
Lele27g1377 992 PRINTS Bacterial sensor protein C-terminal signature 643 656 IPR004358 GO:0016310|GO:0016772
Lele27g1377 992 FunFam Putative histidine kinase 5 359 436 - -
Lele27g1377 992 CDD HisKA 373 432 IPR003661 GO:0000155|GO:0007165
Lele27g1377 992 SUPERFAMILY CheY-like 842 992 IPR011006 -
Lele27g1377 992 MobiDBLite consensus disorder prediction 752 839 - -
Lele27g1377 992 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Lele27g1377 992 Pfam Response regulator receiver domain 846 914 IPR001789 GO:0000160
Lele27g1377 992 Gene3D PAS domain 213 348 - -
Lele27g1377 992 MobiDBLite consensus disorder prediction 799 838 - -
Lele27g1377 992 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Lele27g1377 992 ProSiteProfiles Histidine kinase domain profile. 378 659 IPR005467 -
Lele27g1377 992 FunFam Histidine kinase 5 213 348 - -
Lele27g1377 992 CDD HATPase_EvgS-ArcB-TorS-like 487 656 - -
Lele27g1377 992 Coils Coil 92 119 - -
Lele27g1377 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Lele27g1377 992 MobiDBLite consensus disorder prediction 755 771 - -
Lele27g1377 992 MobiDBLite consensus disorder prediction 772 786 - -
Lele27g1377 992 ProSiteProfiles Response regulatory domain profile. 845 991 IPR001789 GO:0000160
Lele27g1377 992 SMART REC_2 844 987 IPR001789 GO:0000160
Lele27g1377 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 657 IPR003594 -
Lele27g1377 992 Coils Coil 181 208 - -
Lele27g1377 992 CDD REC_hyHK_CKI1_RcsC-like 846 987 - -
Lele27g1377 992 SMART HKATPase_4 482 659 IPR003594 -
Lele27g1377 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 659 IPR036890 -
Lele27g1377 992 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 13 991 - -
Lele27g1377 992 Gene3D - 838 992 - -
Lele27g1377 992 MobiDBLite consensus disorder prediction 551 576 - -
Lele27g1377 992 FunFam Histidine kinase 5 838 992 - -
Lele27g1377 992 Gene3D - 437 663 IPR036890 -
Lele27g1377 992 Gene3D - 358 436 - -
Lele27g1377 992 MobiDBLite consensus disorder prediction 560 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1377 Lele-ChrLele27 20206443 20210981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1377 1 991 Histidine Kinase Gene Family AT5G10720 58.665 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele27g1377 HATPase_c 1.7e-27 CL0025