Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1367 ATGGCTTCCCCAACACCTAATTATCCCGAACACACTCTCAGAACTACTGGCGACTCCTGCTCCACTAAATACAAAGGCGTCAGAAAGCGAAAATGGGGCAAATGGGTGTCTGAAATCAGGCTTCCCAACAGCCGTGAGCGCATTTGGCTGGGCTCCTATGACTCGCCAGAGAAGGCGGCCCGAGCCTTCGACGCCGCCCTCTACTGCCTGCGCGGTCGTCATGCCAGTTTCAACTTCCCGGACACGCCTCTGGAGTTGGAGATCCCCGCCTCAGGCGATCACCGACACCAGTCTCGCTCCGCTCAAGAAATCCAAGAGCTTGCTGCTAGGTTTGCCAACGAGTACCAGCAGGACCCACCAATGGTTCAGCAATCTTCAGAAGCGGCCGCTCCTTCATCCTGCGAATCAGATGGCGTTACGGAGAGTGGTGATCCTGTAGAGGTGGACAACGATGTCGGGGACACAAGGGGCATTAACGACTGGTCGTTTTTGAAGTCACTGGATGAGATTGGCTCGGCCAATTACAGTAATTATAATTGTAATGGTTTCTACTCTGGATTCGATAAGATGCACTCTGGTGAGTTATTGTTTCCCACATCACCACCTCATTTGCTCATCGATCATAACGTTAGTGACAATGGGAACGCAATGGAATGCGATGACGCTTTTTCCCCACAATCATTGTTCCTTTGGAACTTTTGA 702 0.5157 MASPTPNYPEHTLRTTGDSCSTKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRHASFNFPDTPLELEIPASGDHRHQSRSAQEIQELAARFANEYQQDPPMVQQSSEAAAPSSCESDGVTESGDPVEVDNDVGDTRGINDWSFLKSLDEIGSANYSNYNCNGFYSGFDKMHSGELLFPTSPPHLLIDHNVSDNGNAMECDDAFSPQSLFLWNF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1367 233 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Lele27g1367 233 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Lele27g1367 233 MobiDBLite consensus disorder prediction 119 139 - -
Lele27g1367 233 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lele27g1367 233 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Lele27g1367 233 MobiDBLite consensus disorder prediction 119 152 - -
Lele27g1367 233 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele27g1367 233 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lele27g1367 233 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele27g1367 233 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele27g1367 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 149 - -
Lele27g1367 233 MobiDBLite consensus disorder prediction 1 20 - -
Lele27g1367 233 CDD AP2 22 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1367 Lele-ChrLele27 20160046 20160747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1367 13 233 AP2-EREBP Transcription Factor Family AT1G19210 43.860 1.11e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele27g1367 AP2 1.2e-12 CL0081