Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1359 ATGGATTGCCTTACATTATTACCCTTTTCTCTGCAGACTCACAGCGAAGCCAGAGACGCAGAGAGAAAGCGACCCCTTATTTACAATGGCATGTGTTTAAGGAGGGCTTTATGTGTCTGCTTGGCAGAAGACAGGTCTACGGAGAGAGCAGTTATGGCATTTCGGTTTGGACTTGTTCTTCTGGCTTTTGTCATTTGTTTGAACTTCAACTCGGTGGATTCAGACGATGGAGCAACATTACTAGGGATAAAGAAGTCATTTAGGGATGTGGAAAATGTTCTATGTGACTGGACAGACTCTCCATCTTCCGATTATTGTGTCTGGAGAGGGATCATATGCGATAATGTCACCTTCAATGTCGTTGCACTAAACCTCTCAAGTTTGAATCTGGACGGTGAAATCTCACCTGCTATAGGGGGCCTTAAGAGCTTGGTCTCTATCGACCTTAGGGGGAACCGATTATCTGGCCCGATACCAGATGAGATTGGTGACTGTTCCTCTTTGAAGAGCTTGGACTTATCATTTAATGAAATACGGGGAGACATACCATTTTCGATTTCAAAGTTGAAACAACTGGAAAATCTAATTTTGAAAAATAACCAGTTAATAGGACCAATTCCTTCTACATTGTCTCAGATTCCCAACTTGAAGATTCTGGACCTGGCTCAAAATAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTCTTGCAATATCTTGGCTTGCGAGGGAACAATTTAGGGGGTTCACTCTCTCCTGATATGTGCCAATTAACTGGACTATGTGATGTGAGGAACAACAGCTTGACTGGCAGCATTCCTGAAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTGACTGGAAAGATACCATTCAATATTGGGTTTCTTCAAGTAGCAACATTGTCATTGCAAGGCAATAAACTATCTGGACCTATTCCATCAGTGATTGGGCTGATGCAAGCACTTGCTGTATTAGATTTGAGTTGTAACAAGCTAAGTGGACCAATCCCACCTATCTTGGGAAATTTGACATACACTGAAAAATTGTATTTGCACGGGAATAAACTGTCTGGCTACATTCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTGAGTGGCCATATCCCATCCGAGCTTGGAAAGCTTACTGATCTGTTTGATTTAAATGTTGCTAACAACAACCTTGAAGGGCCAATTCCTGATAATATTAGCTCATGCAAAAATCTCAACAGCCTCAATGTGCATGGAAACAAGTTAAATGGAACAATCCCCCCAACTTTTCAGAGCTTGGAGAGTATGACTTATCTGAACCTTTCCTCCAACAAGCTTCGAGGCCCCATTCCAATTGAGCTGTCAAGGATTGGTAATTTGGATACCTTGGATATTTCGAATAATAATATAAGTGGCTCCATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGTAGAAATCATCTAACTGGATTTATTCCAGCAGAGTTTGGTAATTTAAGAAGTGTTATGGATATAGATCTTTCAAATAACCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTGCAGAATATGCAATCACTGAGATTGGAAAACAACAATCTATCCGGGGATGTGACTTCTCTTATAAATTGCCTTAGCCTTTCTTTACTCAATGTGTCCTATAACAACCTAGTTGGTGTAATTCCCACAAGCAATAATTTCTCCAGGTTCTCTCCAGATAGTTTCATTGGAAACTCTGGTCTCTGTGGCGATTGGATGACTTCACCTTGTCATAGATCTCATCCCACAGAACGAGTTACGCTATCTAAGGCTGCCATTCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCATCGTGTCGGCCATACAATCCATCCCCATTTCCAGATGGATCACTTGACAAGCCAGTTACTTATTCACCGCCAAAGCTAGTGATTCTTCATATGAACATGGCTCTTCACGTTTATGAGGATATTATGAGGATGACTGAAAATCTGAGTGAGAAGTACATAATTGGATATGGTGCATCAAGCACAGTTTATAAATGCGTCCTTAAGAACTGCAAGCCAGTAGCCATCAAGAAGCTCTATTCTCACTATCCCCAAAGCTTGAAAGAATTTGAGACAGAACTTGAGACGGTTGGTAGTATCAAGCACCGAAACCTGGTTAGTCTCCAAGGCTACTCCTTGTCCCCTTATGGGAACCTTCTCTTCTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTCCATGGAGCTTCTAAAAAGAAAAAGCTTGACTGGGACCTTCGTTTAAAAATAGCACTAGGAGCAGCACAAGGGCTTGCTTATCTACACCATGATTGTTGCCCCCGGATCATCCACAGGGATGTGAAATCATCAAATATTCTGTTGGACAAGGACTTTGAGGCCCATCTCACTGACTTTGGCATTGCTAAAAGTCTATGCCCCTCCAAATCCCACACTTCAACTTACATAATGGGTACAATCGGTTATATAGACCCTGAATATGCTCGAACTTCCCGTCTCACTGAGAAGTCTGATGTTTATAGTTTTGGCATCGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCAAATCTCCATCACCTGATTTTGTCAAAGACAGCAAACAATGCTGTGATGGAGACGGTTGATCCTGATATTACTGCCTCATGTAAGGATATGGGAGCAGTAAAGAAGGTATTTCAGCTAGCCCTTTTGTGCACAAAGAGGCAGCCAGTTGAGAGGCCGACAATGCACGAGGTGATGCGCGTGCTGGGAAGCCTTGTACCACCCACCTCCCCACCAAAACAAGTATCCCCACCTCCTGCAGCTTCTGCTCTGCTTCCATCTACAAAGGTGCCATCGTGCTATATGGACGAGTATGCCAATCTGAAGACTCCACACTTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGGGAGGTAATTTCTCAGAACAGTGAATGA 3099 0.4272 MDCLTLLPFSLQTHSEARDAERKRPLIYNGMCLRRALCVCLAEDRSTERAVMAFRFGLVLLAFVICLNFNSVDSDDGATLLGIKKSFRDVENVLCDWTDSPSSDYCVWRGIICDNVTFNVVALNLSSLNLDGEISPAIGGLKSLVSIDLRGNRLSGPIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLCDVRNNSLTGSIPESIGNCTAFQVLDLSYNQLTGKIPFNIGFLQVATLSLQGNKLSGPIPSVIGLMQALAVLDLSCNKLSGPIPPILGNLTYTEKLYLHGNKLSGYIPPELGNMTKLHYLELNDNHLSGHIPSELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVHGNKLNGTIPPTFQSLESMTYLNLSSNKLRGPIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMQSLRLENNNLSGDVTSLINCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGDWMTSPCHRSHPTERVTLSKAAILGIALGALVILLMILLASCRPYNPSPFPDGSLDKPVTYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDMGAVKKVFQLALLCTKRQPVERPTMHEVMRVLGSLVPPTSPPKQVSPPPAASALLPSTKVPSCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1359 1032 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 266 962 - -
Lele27g1359 1032 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Lele27g1359 1032 Pfam Leucine rich repeat 408 463 IPR001611 GO:0005515
Lele27g1359 1032 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Lele27g1359 1032 SMART LRR_typ_2 213 237 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 498 521 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 450 474 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 330 354 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 378 402 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 522 545 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 546 569 IPR003591 -
Lele27g1359 1032 SMART LRR_typ_2 141 165 IPR003591 -
Lele27g1359 1032 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 73 237 - -
Lele27g1359 1032 Gene3D Phosphorylase Kinase; domain 1 670 771 - -
Lele27g1359 1032 Pfam Protein kinase domain 699 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1359 1032 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 346 618 - -
Lele27g1359 1032 ProSiteProfiles Protein kinase domain profile. 696 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1359 1032 SUPERFAMILY L domain-like 100 349 - -
Lele27g1359 1032 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 238 345 - -
Lele27g1359 1032 Gene3D Ribonuclease Inhibitor 491 617 IPR032675 -
Lele27g1359 1032 Gene3D Ribonuclease Inhibitor 308 396 IPR032675 -
Lele27g1359 1032 Gene3D Ribonuclease Inhibitor 397 490 IPR032675 -
Lele27g1359 1032 Gene3D Ribonuclease Inhibitor 237 307 IPR032675 -
Lele27g1359 1032 Gene3D Transferase(Phosphotransferase) domain 1 772 970 - -
Lele27g1359 1032 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 667 771 - -
Lele27g1359 1032 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 772 973 - -
Lele27g1359 1032 ProSiteProfiles Leucine-rich repeat profile. 476 499 IPR001611 GO:0005515
Lele27g1359 1032 SUPERFAMILY Protein kinase-like (PK-like) 674 962 IPR011009 -
Lele27g1359 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Lele27g1359 1032 SMART serkin_6 696 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1359 1032 ProSiteProfiles Leucine-rich repeat profile. 167 190 IPR001611 GO:0005515
Lele27g1359 1032 ProSiteProfiles Leucine-rich repeat profile. 215 237 IPR001611 GO:0005515
Lele27g1359 1032 SUPERFAMILY RNI-like 266 584 - -
Lele27g1359 1032 Gene3D Ribonuclease Inhibitor 73 236 IPR032675 -
Lele27g1359 1032 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Lele27g1359 1032 Pfam Leucine rich repeat N-terminal domain 74 114 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1359 Lele-ChrLele27 20105874 20113727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1359 143 966 Receptor kinase-like Gene Family AT5G07180 68.561 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele27g1359 Pkinase 3e-44 CL0016