Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1348 ATGGGGAGGAGTCCTTCGTGCAGTAATGAAGGGCAGAAAAGGGAGGCTTGGACTGCTCAAGAAGACAGAATATTGGCTGCTTATATCAGCGCACATGGCGAAGGCAAATGGAAAAACATCCCCAAACAAACTGGTCTGAGGAGATGTGGGAAATCGTGTAGGCTTCGGTGGATGAATTACCTGAGGCCAGATATCAAAAGAGGAAACATTACTGAAGACGAAGAAGATCTCATTCTCAGGCTCCACAAGCTCTTGGGCAACAGATGGTCACTGATAGCGGGAAGACTTCCGGGGCGAACAGACAATGAAATCAAGAACTACTGGAAAACCAACTTGGCCAAGAAGGAGAAAGAGAAGCGATCCAAAGATGTATCTCAAAATGGAAAAAGTGAAATTGAAGAATCAAGAGTTTCCCAGGAGGCTTTGGAGACGGTTCCTCAAAGCACTCAAATGGTGTTAGACACGTCAACTCCGATGGAACCCAACACTGCGGAGTGTTATGGTCAATCGTCGCCGGCGGAAGAAAACGTGGATGGGGCTCTGAAGGATTTTGATTTCGAGGACGTGGAGTTTTTGGAGTTTCTAGACTTGGATTTTACTGGACTTGCGGATCTTGACATGTGGATTAACATGGACGATTTGCAGCAAGAAGGAAGGCAGAGTGATTCTCAGTCATTTTCATTTTCTGCGGAAACAAATGCTGCGCGGGAGAACCAGAATGTCTCCGATTAA 732 0.4631 MGRSPSCSNEGQKREAWTAQEDRILAAYISAHGEGKWKNIPKQTGLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWKTNLAKKEKEKRSKDVSQNGKSEIEESRVSQEALETVPQSTQMVLDTSTPMEPNTAECYGQSSPAEENVDGALKDFDFEDVEFLEFLDLDFTGLADLDMWINMDDLQQEGRQSDSQSFSFSAETNAARENQNVSD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1348 243 SMART sant 13 63 IPR001005 -
Lele27g1348 243 SMART sant 66 114 IPR001005 -
Lele27g1348 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele27g1348 243 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele27g1348 243 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele27g1348 243 MobiDBLite consensus disorder prediction 116 147 - -
Lele27g1348 243 CDD SANT 71 112 IPR001005 -
Lele27g1348 243 MobiDBLite consensus disorder prediction 116 138 - -
Lele27g1348 243 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele27g1348 243 MobiDBLite consensus disorder prediction 216 243 - -
Lele27g1348 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele27g1348 243 Gene3D - 6 67 - -
Lele27g1348 243 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 197 - -
Lele27g1348 243 FunFam MYB-related transcription factor 13 66 - -
Lele27g1348 243 CDD SANT 16 61 IPR001005 -
Lele27g1348 243 Gene3D - 71 141 - -
Lele27g1348 243 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele27g1348 243 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1348 Lele-ChrLele27 20042258 20043164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1348 1 229 MYB Transcription Factor Family AT4G38620 44.206 3.18e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g1348 Myb_DNA-binding 7.4e-14 CL0123