Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1347 ATGGGGAGAGTTCCATGGTGGTCGGAGAAAGGAGAAGGACTGAAAAGAGGGGCATGGACTGCTCAAGAGGACAAGTTACTCACTTCTTACATTATGGCCCACGGCGAAGGCAAATGGACCCACGTCCCTAAAGCGGCTGGGGTGGCAAAAGCTGTAGACTCAGATGGTCGAACTATCTCAGGCCAGACATTAAGCAAGGAAACATCACTCGCGATGAAGAAGATCTCATCATTAGGCTCCATAAACTTGTTGGCAACAGCTGGAAGGATACCCGGACGAACAGACAATGAAATAAAAAACTACTGGAACACCACTCTGTCAAAGAAGCTTAGAACACAATCATGTGCAATGAGGACTGAACAACATACAACGGACAAGTCAACAGCAAGGAAGCTGTCACCAATCATCCAAACAAAGCCTTGGAAATGCAAAAACGCGGTTATCCGACATCCCCCGTGTCCCAAGGAAAATCTGCTTTCAAACCAGATAGAGTGTCAGGAAGCTGACCTAAATAATCAATCTCAAAACTCACCTCCTCCAGAGTCTCGAGTTAATAATGTCCAAGAACATCATCAGTTCAATCAAACTGACAACTTTGACGGGAGTTTGCTGAGCCGCGGAAACAATTTTCCTTGCAATGATCAGTGCCAACCTATTGACCAAGTTATGTTGAATGGTTGGACCACAAGTTGCTTCGAGGTCGACATCAATAGTATTGCCACGTGGGAGATAGATTCTTTGGCCCTCCTCCTGGAATCTGAGGTTTTGGAAGCGTGTCCCGTGAATTGA 789 0.4613 MGRVPWWSEKGEGLKRGAWTAQEDKLLTSYIMAHGEGKWTHVPKAAGVAKAVDSDGRTISGQTLSKETSLAMKKISSLGSINLLATAGRIPGRTDNEIKNYWNTTLSKKLRTQSCAMRTEQHTTDKSTARKLSPIIQTKPWKCKNAVIRHPPCPKENLLSNQIECQEADLNNQSQNSPPPESRVNNVQEHHQFNQTDNFDGSLLSRGNNFPCNDQCQPIDQVMLNGWTTSCFEVDINSIATWEIDSLALLLESEVLEACPVN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1347 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 110 IPR017930 -
Lele27g1347 262 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 182 - -
Lele27g1347 262 SMART sant 15 108 IPR001005 -
Lele27g1347 262 Gene3D - 13 111 - -
Lele27g1347 262 CDD SANT 18 106 IPR001005 -
Lele27g1347 262 ProSiteProfiles Myb-like domain profile. 11 106 IPR001005 -
Lele27g1347 262 SUPERFAMILY Homeodomain-like 13 102 IPR009057 -
Lele27g1347 262 Pfam Myb-like DNA-binding domain 16 47 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1347 Lele-ChrLele27 20038308 20039302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1347 1 110 MYB Transcription Factor Family AT2G47460 43.697 1.69e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g1347 Myb_DNA-binding 1.1e-05 CL0123