Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1345 ATGGGGAGGAGTCCCAGTTGCTATGGAGAACAAGGACTGAAGAAAGGAGCATGGACTGCTCAAGAGGACGAGTTGCTCACTTCTTACATTATGGCCCATGGGGAAGGCAAGTGGACCCACATCCCTATAAGAGCTGGCTTGAATAGGAGTGGGAAAAGCTGTAGGCTTCGATGGTTGAACTATCTCAGGCCTAATATTAAGAGAGGTAACATCACCCAAGATGAAGAAGACCTCATTATCAGACTTCATAAACTTCTTGGAAACAGATGGTCTCTTATGGCTGGAAGGCTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTACTTTGGCAAAGAAGCTTAGAACACAATCAGGAGCAACTTCTGAACAACATGAATCCAGCAAATCAAGCACATCTGATGATATCATTCGGCCACAAGTAATCCAAACGAAGGCCCGAAGATTAAAAAACGTGGTTATCCAACATTCCCCTAAAAATTATCCTGAGGAAACGTCCGCCGTCAACTCTCTAGCTTCCAACCAGTTAGGGTTTGACGAAGCTCATCAGCTAGCTCCCCAGTTCACGAACCAGTTTCTGCAGGCTGTAGATGAATATCAGAATTCAGATGTGAACTTGTTGGGTCCTGAAAGGAATATTGATGAGTTTCAAGATCAACTGAATGCAGTAGATTTTTTCAGAGAGTTTAACCTTGACAATAATAGCATGGGCATGGGCATGGATGCTCAAGCAGACGAGTTCCCACCTATCGACGAACTTGCCAATTGTGGGACAAGTGATGATGGATTCAGGAACATTGGCACTATGGATCTGGATTTAATGACATTCATGTTGGATTCTGGCTCTGTGGATTGGCCCTGA 870 0.4425 MGRSPSCYGEQGLKKGAWTAQEDELLTSYIMAHGEGKWTHIPIRAGLNRSGKSCRLRWLNYLRPNIKRGNITQDEEDLIIRLHKLLGNRWSLMAGRLPGRTDNEIKNYWNTTLAKKLRTQSGATSEQHESSKSSTSDDIIRPQVIQTKARRLKNVVIQHSPKNYPEETSAVNSLASNQLGFDEAHQLAPQFTNQFLQAVDEYQNSDVNLLGPERNIDEFQDQLNAVDFFREFNLDNNSMGMGMDAQADEFPPIDELANCGTSDDGFRNIGTMDLDLMTFMLDSGSVDWP 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1345 289 Gene3D - 70 141 - -
Lele27g1345 289 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele27g1345 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele27g1345 289 Gene3D - 14 67 - -
Lele27g1345 289 CDD SANT 72 113 IPR001005 -
Lele27g1345 289 FunFam Transcription factor TT2 71 140 - -
Lele27g1345 289 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele27g1345 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele27g1345 289 CDD SANT 17 62 IPR001005 -
Lele27g1345 289 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 160 - -
Lele27g1345 289 MobiDBLite consensus disorder prediction 119 140 - -
Lele27g1345 289 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Lele27g1345 289 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele27g1345 289 SMART sant 14 64 IPR001005 -
Lele27g1345 289 SMART sant 67 115 IPR001005 -
Lele27g1345 289 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele27g1345 289 FunFam Myb transcription factor 15 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1345 Lele-ChrLele27 20033286 20034340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1345 3 143 MYB Transcription Factor Family AT3G13540 59.574 5.28e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g1345 Myb_DNA-binding 9.1e-15 CL0123