Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1340 ATGGATTCTAAGCATCGAGCTTTCAAAGGCGGTGAAGTTAGCTCGGCTGAGAAGAAAAGAGCCAACGAAGGAGATGTGGTGGTGACTATTCCGGGCCAGCAGAATCCCAATCTTACTGGGGAGAGTCAAAGCTCCAAAGTGACTGAATCTAACAATACGTCCACCGAGCACGCTAATGGGTATGCCTCGCCTGAGCCAAGATCCAGTGCCAGCCCAAACAAGTCTCCAGAAGTTTGTGCTACGACCCGAAACCTTATTCGCAGAAAGTCTCTACAAAGGTCAGCTTATTCTAAGCCTAAATCTAGATTCGTGGAACAACCTTATCCTGCTGATGCAACAGTTTTAGAAGAGAATGTCACTGCCACTCTGCAAGAACAGCTTGCCTTTGGTTCGCCTAATAACAAATCAGCTACTGTTAATAGGACAGTGTCCATTAGTTCCGTCACTCCTAAGACGCCGTTGATGGCGTCTCCGGGGCCAGCTGGGGAAGATGAGGATGAAATCGTTTATAGGAAAGTTGAACTGAGTAAAGGGAAGCGTAAGACGGTGAAGGTTAAGGCTTTGATCGAGTGTATTATGCTTGCGTGCATTACGGGAATCTTGGTTGCTAGCCTGAAGGTTAAAAAATTGAAAAACGTAATGATTTGGGGGTTGGGGTTTTGGAAGTGGTGTGTACTTCTGATGGTTATCTTTTGTGGGATGTTGATTACCAGATGGTTCGTGCACATTATAGTTTTCCTGATTGAAATGAACTTCTTACTGAAGAAAAAGGTTCTCTATTTTGTTCATGGACTAAAGAAAAGTGTCCAAGTCTTCATTTGGCTGGGTCTGGTTCTCCTCGCTTGGGTTTTGTTAATCAATCGCGGGGTCCGGCGATCAGAACTAGACGCAAAAATTTTGAATGGTGTATCATGGACTCTTGTTTCTCTTCTCATTGGGTCATTCTTATGGGTGGTGAAGACGTTGCTGCTGAAGATATTAGCCTCAAATTTCCATGTCAAATCTTTTTTTGATAGGATTCAAGAATCAATTTTCCATCAGTATGTTTTACAGAGTCTATCTGGGCCTCCATTAATAGAGGATGCTGAGAAGATTGGTAGATCACCAAGTGTTGGCCAGGTTAGTTTCAGGAGCACAAAAGGTGAAAAAAAGGGCACAAAGAAAGAGGTCATTAATATGGCGACTTTTCACAAGATGAAACGGGAGAAAGTTTCTGCTTGGACTATGAAGATTTTGGTTGATGCAGTGGCGAATTCAAGGCTGTCCACAATCTCTAATGTGCTAGATGAGAGCTTCGACGATGGAGGACTAGAACAAACCGACAAGGAGATTACGAACGAGATGGAAGCAACCGCTGCTGCATATAAGATTTTCAGGAATGTGGCTGCCCCTGGTTGTTCGTACATAGATGAAGATGACCTCCGGAGGTTCATGATTAAGGAAGAAGTAGATATGGTATTTCCCCTATTCGAAGGATCAGAGACCGGACGAATAGACAGAAAGGCTTTGACAAAATGGGTGGTGAAGGTCTATCAGGAACGCAAGGCATTGGCGCATGCCTTAAGCGACACCAAGACTGCTGTAAAGCAATTAAACAAGCTTGTGACAGGGATCCTGGTTGTTTTGATCATAATTCTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTACTAGTGTTCATTTCATCTCAGCTAGTTGTTGCAACCTTCATGTTTGGAAACACGTGCAAAAATATATTCGAGGCTATCATATTTGTGTTTGTAATGCATCCATTTGATGTTGGCGACCGATGTGTTGTGGATGGGGTTCAGCTATTGGTTGAAGAAATGAACATCTTGACAACGGTATTCTTGAAACTTGATAATGAGAAGGTGTTCTATCCAAACTCAGTTCTGGCCACAAAACCCATTAGCAATTATTACAGGAGCCCGGATATGGGTGACACTGTGGACTTTTCAATTGACTTTATGACACCGTTGGAGAGGATTGGGGCACTGAAGGAAAAAATAAAGAGGTACTTGGAGAGAAATCCGCAACACTGGCGTCCTAATCACAATGTAATAGTGAAGGAGATAGAAAATGTGAACAAGATTAAAATAGCCCTGTATGTTACGCACACAATGAATTTTCAAGACTTCGCGGAGAAGAACAGGAGGAGAACAGAACTGGTGATAGAACTAAAGAAAATATTTGAGGAGCTCGATATTAGATACTTTCTTCTTCCTCAGGCAGTTCATCTCAGCTATGTTCGATCAGACACGGGCCCACTATAG 2277 0.43 MDSKHRAFKGGEVSSAEKKRANEGDVVVTIPGQQNPNLTGESQSSKVTESNNTSTEHANGYASPEPRSSASPNKSPEVCATTRNLIRRKSLQRSAYSKPKSRFVEQPYPADATVLEENVTATLQEQLAFGSPNNKSATVNRTVSISSVTPKTPLMASPGPAGEDEDEIVYRKVELSKGKRKTVKVKALIECIMLACITGILVASLKVKKLKNVMIWGLGFWKWCVLLMVIFCGMLITRWFVHIIVFLIEMNFLLKKKVLYFVHGLKKSVQVFIWLGLVLLAWVLLINRGVRRSELDAKILNGVSWTLVSLLIGSFLWVVKTLLLKILASNFHVKSFFDRIQESIFHQYVLQSLSGPPLIEDAEKIGRSPSVGQVSFRSTKGEKKGTKKEVINMATFHKMKREKVSAWTMKILVDAVANSRLSTISNVLDESFDDGGLEQTDKEITNEMEATAAAYKIFRNVAAPGCSYIDEDDLRRFMIKEEVDMVFPLFEGSETGRIDRKALTKWVVKVYQERKALAHALSDTKTAVKQLNKLVTGILVVLIIILWLLLMEIATTKVLVFISSQLVVATFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVFYPNSVLATKPISNYYRSPDMGDTVDFSIDFMTPLERIGALKEKIKRYLERNPQHWRPNHNVIVKEIENVNKIKIALYVTHTMNFQDFAEKNRRRTELVIELKKIFEELDIRYFLLPQAVHLSYVRSDTGPL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1340 758 MobiDBLite consensus disorder prediction 1 24 - -
Lele27g1340 758 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 749 IPR016688 -
Lele27g1340 758 MobiDBLite consensus disorder prediction 1 78 - -
Lele27g1340 758 Pfam Mechanosensitive ion channel 534 738 IPR006685 GO:0016020|GO:0055085
Lele27g1340 758 PIRSF Memb_At2g17000 6 755 IPR016688 -
Lele27g1340 758 Gene3D - 592 641 IPR023408 -
Lele27g1340 758 SUPERFAMILY Sm-like ribonucleoproteins 582 641 IPR010920 -
Lele27g1340 758 MobiDBLite consensus disorder prediction 28 78 - -
Lele27g1340 758 FunFam Predicted mechanosensitive ion channel 592 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1340 Lele-ChrLele27 19987850 19990514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1340 16 749 Mechanosensitive Ion Channel Family AT5G12080 58.667 0.0 857