Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1339 ATGCAGAGTTTAACTTCGCCACGGTTGTCTAGGCAATCATCCAAAGCGAGTAGCAAGCACAAGCAACTAGTGGATGCACCAAGCCCTGTTCCTAGTGGTTGCTGCCGAGGTTTCGGTAATGTCAAGACCACGGGACCCACTTTGTCAACCTTGCAACACCAGCAGCAGCTCCAACATTCCAAGAGATTGGAAACGAAGGGGGAAGCTGAGAAGCCCACAGCTGACACCCCCTGCACATTACTTGGACCCCCAAAAATACCTCAAAGTTTCAGTCTTGGTCCAGATTGGAGCCGGGATGAGAGGTGGGGTTTAGACCTGGGTTGGATAGATTTGGAGAAAGAAGTGCAGAGGCAGAAAGAGCTACGAGTGATGTATAGGAAAAGGATGGAAAGAACGCAGGAGTATCTGAGATCCTGCCTCCAAATAGCACAAGAGAATGGTATATTGGACCTCATCACCCACTCCAAGGGTGACCCCAAACAATCCCCTTTATCAGCCCCCACTGTCAACTCCGCCGCTAGTCCTCGCCACCACCACCACCCAGATCTTGCAGCCATCGTTGATCAAGCCAAAATCAATGGATGGTACATTGATCCTGTTGAGATTCAGCTGGGGGAGAAGATAGGACAGGGAACCACGGCGGAGGTTTGTGCTGTAGCTGATGGGGGCATGCCTGGACCCTCCCCGCCACGCCTGGGTGGTCACAGAGCATGTCAGCACCAACCTCAAAGACTGGCTTCACGGCCCCGGCAAGAGACGCCGAGACAGGCAGGAACGTACGTGTACATGGCACCGGAGGTGATTCGATGCGAGCCTTATAATAAAAAGTGTGACTTATACAGTTTCGGGGTGATACTGAACGAGCTTCTAACCGGAGATTACCCTTACATTGAGACAGACTGCAGTCCTACCAAGATTGCAGTGGAAGTAGTGGAAGGGAAACTGAGGCCGATGGTTCCGGAGGATAGGGATGGGGAAGTAGAGGAGCTGGTGCAAGTGATCAGACTTTGTTGGGATGGCAATCCAACGATAAGACCCTCCTTCGCAAGCATTACGAGTACCCTCAAAGCCTACATAAAGAGGGCCTCTTTCAAGTGGCTAATTAGCTAA 1110 0.5162 MQSLTSPRLSRQSSKASSKHKQLVDAPSPVPSGCCRGFGNVKTTGPTLSTLQHQQQLQHSKRLETKGEAEKPTADTPCTLLGPPKIPQSFSLGPDWSRDERWGLDLGWIDLEKEVQRQKELRVMYRKRMERTQEYLRSCLQIAQENGILDLITHSKGDPKQSPLSAPTVNSAASPRHHHHPDLAAIVDQAKINGWYIDPVEIQLGEKIGQGTTAEVCAVADGGMPGPSPPRLGGHRACQHQPQRLASRPRQETPRQAGTYVYMAPEVIRCEPYNKKCDLYSFGVILNELLTGDYPYIETDCSPTKIAVEVVEGKLRPMVPEDRDGEVEELVQVIRLCWDGNPTIRPSFASITSTLKAYIKRASFKWLIS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1339 369 Pfam Protein tyrosine and serine/threonine kinase 258 355 IPR001245 GO:0004672|GO:0006468
Lele27g1339 369 MobiDBLite consensus disorder prediction 153 178 - -
Lele27g1339 369 SUPERFAMILY Protein kinase-like (PK-like) 253 353 IPR011009 -
Lele27g1339 369 MobiDBLite consensus disorder prediction 1 21 - -
Lele27g1339 369 MobiDBLite consensus disorder prediction 1 32 - -
Lele27g1339 369 MobiDBLite consensus disorder prediction 158 172 - -
Lele27g1339 369 SMART serkin_6 202 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1339 369 Gene3D Transferase(Phosphotransferase) domain 1 219 365 - -
Lele27g1339 369 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 255 357 - -
Lele27g1339 369 ProSiteProfiles Protein kinase domain profile. 1 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1339 369 MobiDBLite consensus disorder prediction 60 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1339 Lele-ChrLele27 19980150 19982666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1339 256 360 MAP Kinase Kinase Kinase AT4G35780 40.000 4.18e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Lele27g1339 PK_Tyr_Ser-Thr 1.3e-14 CL0016