Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1336 ATGGGAGACCCCTGGACTATTGTTCCGTACAATGACCCCTTCGATTTCCCATTACCCCATGACATCCTCGATTTCCTGGATCATCATATTCCAACCTCTGCAGGTCCATCCATTGAGCACGATGCTTCTTCGTTCCCACCACAAAATGATGCATTTTTTCAGGGTAATGATCCGAATTCCGGTCAATTTTGGTTGGCTTGCCACGAACAACTAGTGACCGAGTTTGAACCTGTTGGAAAATCGATTAGTTTTTGCAGCAGAAGTATAGAGGATGTCAAGAATTTTATAAGGCAGTACAGCGCAGAGAAAAATGCAGCAGGCTACTTCACTTTGCCAGATCCACTCTCAGCTTATTATGAAGCCCTCTGCATTGGAATGGAATGGAATGAAGATTTAAGCGACGAATTCCTCGACACCAACGCTGATAATTCAGGGGGAGCATCTGATGAGACCGAGGACTTGGATAGGACTGCTAGGGCTAGTCTTGCAACGCAGAGGGAGAGAGCGGGGAAGATGAAGCTGAGTGATTTCAAGGAAGTGTTTCATCTACCTATTGAAGAAGCAGCAAAGCAAGTAAACTTATGTCCTACAGTTGTGAAGAAGATATGCCGTAAAGAAGGATTGCCCAGATGGCCACACAGAAAGATAAAGAGCATAGTGAAGAAGATGACCATACTGAGAGGGAGTTTAAACTCGGCAGAGGCAGCGTCAAGGGCACAAACGGAGGCAGAAATCGCGAGACTTCGTGGAGAAATATTTGAACATTGTGGCGGAATGATCCCATCTTCATTAAATTTGGATGCTTGA 807 0.4523 MGDPWTIVPYNDPFDFPLPHDILDFLDHHIPTSAGPSIEHDASSFPPQNDAFFQGNDPNSGQFWLACHEQLVTEFEPVGKSISFCSRSIEDVKNFIRQYSAEKNAAGYFTLPDPLSAYYEALCIGMEWNEDLSDEFLDTNADNSGGASDETEDLDRTARASLATQRERAGKMKLSDFKEVFHLPIEEAAKQVNLCPTVVKKICRKEGLPRWPHRKIKSIVKKMTILRGSLNSAEAASRAQTEAEIARLRGEIFEHCGGMIPSSLNLDA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1336 268 PANTHER PROTEIN RKD4 96 252 IPR044607 GO:0003700
Lele27g1336 268 Pfam RWP-RK domain 172 219 IPR003035 -
Lele27g1336 268 ProSiteProfiles RWP-RK domain profile. 159 239 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1336 Lele-ChrLele27 19966643 19968254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1336 127 236 NLP Transcription Factor Family AT1G64530 30.088 2.54e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele27g1336 RWP-RK 1.8e-20 No_clan