Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1333 ATGAGTGACAGTAATCCTCCAAAACCACCAGATTCACCGGAGAGCGATTTCACAAACCAGAATCCTTTCGATGAGGTCTCTGAATTCTTCAACTTCGAGGATGATGAGGAACCTGATCCGTCAATGATGGTTTATGAACAAGCCCCGAATCCGCAGGTCTATCAAAGCAATGAAGTAGGGGGATTTGGAGCAAGAGACATTAGCTGCAGCGAGGAGAGGAACGTCAAAGACAGAGTTGCATTCAAAACAAAGTCAGAGATAGACGTACTGCACGATGGCTACAAGTGGAGAAAGTACGGGAAGAAGATGGTGAAGAACAGCCCCCACCCGAGGAATTACTATAGGTGTTCGGTGGAGGGATGCCCGGTGAAAAAGAGAGTTGAGAGAGACAAGGAAGATCCAAGCTTTGTTATTACAACCTACGAAGGCGTCCACACCCACCCAAACTTCAGCTAG 456 0.4737 MSDSNPPKPPDSPESDFTNQNPFDEVSEFFNFEDDEEPDPSMMVYEQAPNPQVYQSNEVGGFGARDISCSEERNVKDRVAFKTKSEIDVLHDGYKWRKYGKKMVKNSPHPRNYYRCSVEGCPVKKRVERDKEDPSFVITTYEGVHTHPNFS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1333 151 Pfam WRKY DNA -binding domain 91 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g1333 151 ProSiteProfiles WRKY domain profile. 85 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g1333 151 FunFam WRKY transcription factor 57 76 150 - -
Lele27g1333 151 Gene3D WRKY domain 77 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g1333 151 MobiDBLite consensus disorder prediction 1 25 - -
Lele27g1333 151 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 148 IPR044810 GO:0003700
Lele27g1333 151 SMART WRKY_cls 90 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g1333 151 SUPERFAMILY WRKY DNA-binding domain 83 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1333 Lele-ChrLele27 19952909 19953806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1333 78 150 WRKY Transcription Factor Family AT5G26170 80.822 1.17e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele27g1333 WRKY 1.2e-25 CL0274