Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1316 ATGGGGGTCGTACAGTGGTTGGTGAGTAGTTTTTCATCGGCTTCAACGGCCATGACGGTGGTGGCGATGGTGGTGGTGGGAGTGGTGTGTTATTTGTACGGACCGTATTGGGGAGTGAGGAAGGTTCCAGGCCCACCAGCCGTTCCACTGTTAGGGCACCTTCCCTTGCTGGCTAAGTATGGTCCTGATCTCTTCTCTCTCCTCACCAAGCAGTATGGCCCAATCTACAGATTTCATATGGGAAGACAACCACTGATAATTATAGCAGACCCAGAGCTATGTAAAGAGGCCGGCATCAAAAAATTTAAGGATCTTCGAAACAGAAGCATTCCTTCTCCTATTTCGGCTGCCCCTCTTCACCAGAAGGGTCTCTTTTTCACCAAGGATTCGAGATGGACTATCATGAGAAACACGATTCTGTCACTGTACCAGCCTTCTCACTTGGCCAACTTAGTGCCCATGATGCAATCATACATAGAATCTGCAACACAGAATCTTGATTCCGGCGAAGAAGACATAAGCTTCTCTAATCTCTCCCTCCGGTTGGCTTCTGATGTAATTGGGGAGGCGGCTTTTGGTGTTAACTTTGGACTCTCAAAGCCTCATTTAGCGTGTGATTCAATGAAGAGTGTTAGCGTTACAAGTGATTGTGATAATGGAGTCTCAGATTTCATCAATGAACACATTCACTCCACCACACAACTCAAGATGGACTTGTCGGGTTCCTTCTCCATCATACTTGGTCTTCTTGTCCCCGCGCTCCAAGAGCCATTCCGCCAGATTTGGAAGAGAATTCCGGGCACTATGGATTGGAAAATCGATCGTACCAACAAGATCCTGAGCGGCCGTCTTGATGAGATTGTGGAGGAGAGAATTAAAAACAGAGACCCGAGTTCTAAGGATTTCTTGTCGCTTATATTGAATGCCAGAGAATCAAAATCAGTACCAGACAACATTTTCACTCCAGACTACGTTAGTGCTGTCACCTACGAACACCTTCTTGCCGGTTCAGCGACCACTTCTTTTACTCTGTCTTCCATTGTGTACTTGGTTGCTGAGCATCCGGAAGTAGAGAAAAAGGTGCTTGCAGAGATCGATGCATTTGGCCCACCTCATCAAAAACCCACTGCTAACGATCTTCACGACAAATTTCCTTATCTTGATCAGGTGGTTAAAGAGGCAATGAGGTACTACACTGTCTCCCCACTAGTTGCAAGAGAAACAGCAAATCAAGTAGAAATAGGAGGTTACCTTCTCCCTAAGGGGACATGGGTGTGGTTGGCGCCTGGAGTTCTGGCTAAAGATCCTAGGAACTTTCCGGAGCCAGAAAAGTTCAAACCGGACAGGTTTGACCCGAACTGTGAAGAATCCAAACGAAGGCATGCTTATGCATTTATACCATTTGGAATTGGTCCTCGGGCCTGCATTGGCCAGAAATTTTCCATACAAGAGATCAAGCTTACCCTCATTCATTTATACCGCAAGTATGTCTTTCGGCACTCCCCAAACATGGAAAAACCCGTACAACTTGACTATGGCATTGTTCTTAACTTCAAGAATGGTGTCAAGCTCAGGGCCATTAATAGAACACACTGA 1596 0.4624 MGVVQWLVSSFSSASTAMTVVAMVVVGVVCYLYGPYWGVRKVPGPPAVPLLGHLPLLAKYGPDLFSLLTKQYGPIYRFHMGRQPLIIIADPELCKEAGIKKFKDLRNRSIPSPISAAPLHQKGLFFTKDSRWTIMRNTILSLYQPSHLANLVPMMQSYIESATQNLDSGEEDISFSNLSLRLASDVIGEAAFGVNFGLSKPHLACDSMKSVSVTSDCDNGVSDFINEHIHSTTQLKMDLSGSFSIILGLLVPALQEPFRQIWKRIPGTMDWKIDRTNKILSGRLDEIVEERIKNRDPSSKDFLSLILNARESKSVPDNIFTPDYVSAVTYEHLLAGSATTSFTLSSIVYLVAEHPEVEKKVLAEIDAFGPPHQKPTANDLHDKFPYLDQVVKEAMRYYTVSPLVARETANQVEIGGYLLPKGTWVWLAPGVLAKDPRNFPEPEKFKPDRFDPNCEESKRRHAYAFIPFGIGPRACIGQKFSIQEIKLTLIHLYRKYVFRHSPNMEKPVQLDYGIVLNFKNGVKLRAINRTH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1316 531 Pfam Cytochrome P450 43 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 Gene3D Cytochrome P450 33 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 SUPERFAMILY Cytochrome P450 36 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele27g1316 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Lele27g1316 531 PANTHER THROMBOXANE-A SYNTHASE 17 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1316 Lele-ChrLele27 19869704 19872662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1316 80 529 Cytochrome P450 AT2G26170 71.778 0.0 639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0771 01 4470160 4470723 Lele27g1316 27 19869704 19872662 CCT
Lele02g0748 02 4505877 4506440 Lele27g1316 27 19869704 19872662 CCT
Lele03g0765 03 4464878 4468351 Lele27g1316 27 19869704 19872662 CCT
Lele04g0766 04 4663881 4664444 Lele27g1316 27 19869704 19872662 CCT
Lele25g0759 25 4814700 4817690 Lele27g1316 27 19869704 19872662 hybridization
Lele26g0766 26 4879254 4882157 Lele27g1316 27 19869704 19872662 hybridization