Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1309 ATGAAACAATGTCGACATAGTCGCGCTAAATGGAATGCAAAAGGTCAGGAAGCAGAGCATCGACCGGCTTCTTCCCACCCTTTCTTTCTTCAAAATGACGACATTCTCTCTCTACTTCTCCCTCACTCTCTCTTCCTCGTCTCCTCCTTGCTCACCCCAACCCTCTTACCGTCTGCGTTCTCACCCACCATTATTCCGTTGTCGGTTTCCTCGGTCCGATCACGTCTCTTTTCCCAACCCTGTTCTTTTAAATGTCAGATTCTTCTTCCTCCTTCTCAACCGCTTCCTCTCCCCTCTTCCTCCCTCTTTAAATCCTCCTTCATTCCACCCCTTCTTTCTCCCATGTTCTTCATCGAGGATCTCTGGTCGTTGCTCCAGCTTGAGCGTCCTTTAGGAAAATCTCGCTCTTCAGGATCGCTGTTCCAGTATTTACGTGAAACCATGACCAACTCAAGCTGCGGAGGGGCCGACTTCGAGCTCTGTCGAGACGACTCTGCCGCATTCGTCCTCAAGTTTGTGGCGATCGCATCCATACTCATCGCGGGGATGACCGGAGTCGCCTTACCTCTTTTCGTAAAACATCGGTGTAACCTCCGCACAGACGGCAGCCTCTTCGTTACCGCGAAGGCATTCGCGGCGGGAGTGATTCTGGCCACCGGCTTTGTCCACATGTTATGGGGCTCGTCGGAGGCCTTTTCAAATCCCTGTTTGCCCAAGTCATGGTCAAACTTCCCCTTCACCGGTTTCTTCGCCATGATCTCAGCCCTCTTAACACTCTTGGTTGATTTCGTGGGAACCCAATATTATGAACGGAAACAGGGAATCGCGCGGGCCAACGAAATCCAAGGACGGGTCGGGACGTCAGAGTCGGGCATGGAATCGGGAATTGTGCCCGTTGTTGAGGTTAGGGACACGAGTGGGAAAGTGTTTGGCGAAGAAGAAGGAGGTGGAATGCACATAGTGGGGATGCATGCACACGCCGCACACCATAGGCACAACCACCCACAAGGCCACGACGCCTGTCATGGTGGTGTTAAGGAACGGTCCCATGTCACAGGGCACGGTCATAGCCACTCCCATGGATTCGGAGACGATGAGGATGAAGACGGGGCACGCCATGTCGTCGTTTCACAGGTGTTGGAACTTGGGATCGTATCACATTCAGTTTTAATCGGGATATCTCTGGGAGTGTCGCATAGCCCTTGTACCATAAGGCCACTGATAGCAGCCCTATCATTTCATCAATTCTTTGAAGGATTTGCGCTCGGAGGCTGCATCTCTCAAGCTCAATTAAAGACCTCATCAGCAACCATGATGGCCTGCTTCTTCGCCCTAACGACGCCCTTGGGCATCGGAGTAGGCACGGCGATTTCTTCAGGGTATAACCCATACAGTACAGGAGCACTGGTAACGGAAGGCATATTGGACGCTCTGTCAGCTGGGATTTTAGTGTATATGGCTTTGGTAGACCTAATAGCTGCTGATTTTCTGAGCAAGAGAATGAGCTGTAACCTCAGGCTCCAGATAGTTTCATATTGTATGCTTTTTCTTGGGGCTGGATTGATGGCTTTGCTTGCAATCTGGGCCTGA 1590 0.5145 MKQCRHSRAKWNAKGQEAEHRPASSHPFFLQNDDILSLLLPHSLFLVSSLLTPTLLPSAFSPTIIPLSVSSVRSRLFSQPCSFKCQILLPPSQPLPLPSSSLFKSSFIPPLLSPMFFIEDLWSLLQLERPLGKSRSSGSLFQYLRETMTNSSCGGADFELCRDDSAAFVLKFVAIASILIAGMTGVALPLFVKHRCNLRTDGSLFVTAKAFAAGVILATGFVHMLWGSSEAFSNPCLPKSWSNFPFTGFFAMISALLTLLVDFVGTQYYERKQGIARANEIQGRVGTSESGMESGIVPVVEVRDTSGKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGHDACHGGVKERSHVTGHGHSHSHGFGDDEDEDGARHVVVSQVLELGIVSHSVLIGISLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQLKTSSATMMACFFALTTPLGIGVGTAISSGYNPYSTGALVTEGILDALSAGILVYMALVDLIAADFLSKRMSCNLRLQIVSYCMLFLGAGLMALLAIWA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1309 529 TIGRFAM zip: ZIP zinc/iron transport family 156 529 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele27g1309 529 Pfam ZIP Zinc transporter 169 526 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele27g1309 529 PANTHER ZINC/IRON TRANSPORTER 168 524 - -
Lele27g1309 529 MobiDBLite consensus disorder prediction 348 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1309 Lele-ChrLele27 19820297 19822830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1309 144 529 Inorganic Solute Cotransporters AT1G10970 68.475 6.19e-168 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0766 25 4860504 4862675 Lele27g1309 27 19820297 19822830 hybridization
Lele26g0775 26 4920670 4922816 Lele27g1309 27 19820297 19822830 hybridization