Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1306 ATGTCCAAAATGAAGCATCTACTGCGAAAGCTTCATATAGGTGGTGGGATCAATGAGCCCCACAGGTTGCCTGATACCCGCCCGGTGATCACTCCCAGTCCCGTCCCTAATCTCGTATCATCTTCGTCGACGTTGGCATCGAATACAGTGGGCACAGTCCGGCCAAATGAATCGGTTGCTGATCGGACGGATATTGATGGCGCTGTTGGTATTTGTGGCGACAAGGGAGCTGATTTTAGTTTATTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTAGCTATTAGCGCTTCCGATCCTGATGTCCGCAAGGACCCTGAGTCTGCCCAGATCGACGCCGCCAAGCAGATGAGCCTCGGCTCCGCAGCTTCCGTCACCGACACGGCAGCCATCGTCCAGTTTCAATCGCTTCGTTATTGGAACTATAATGTCATTGATTATGAGGAGAAAGTGATGGATGGGTTCTATGATTTGTATGGATTCTCCTCAAATTTGACTGAACGAGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTACTTCCCTCTCTGAAAATGTTGGTTGCGAAGTGATTTTGGTGAATCGTATGGTTGATATTAGGCTGAAACAGCTTGAGAAAAAAGCCTTTGCTCTATCCAAGGACTGTTGCTTATCCGAACAAGGGCTAGTTTCGAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTTAGTGACCCTGATGAGATGTTGAAAAAGTGGTCAGCAAGGAGTCATGAGTTACGTGATTCTTTGAGGACAATTGTTATTCCCCTTGGCTATCTTGATGTTGGACTTTCTCGCCACCGAGCCCTACTTTTTAAGGTGATGGCTGATAGGATTAATGTTCCCTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGACCATGGAGCTGTGAATTTGATTAGAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCACCTGGTGCTCTTATTCCTACCGAAGTACCCAGTAGTCAGCTCCAAAACTACAGTTTTCTTGAAACAGGTGGTGCTGAGATTGCAGAATTACCTAACAATGCCCATCTCATACATGATGGCGGAACTGGAGTGCTAGCAGTGACATCTGATAATGAGAGAACTTCAACAGTGGGCAGGGCTCAATCAGAACAATTATTGAATGTAGACAGTCAAGGAACAATGGATGCAAGGAACCAAGGTGGAATAAATCAAACAGAAAGATTTGAGCATGATTTGGGAAATCTTCATCAGTCTATGCATATATCATGTGAAAGCACATCACATATAGAAGCACCATCTGCAGAAAAGATGCAAGTAAAAAATTTGTCGGAATATCTCCTCAGTGCAGCGAAGAAGCCAGAATTAGTGCAAAAACTGCAATCTGTCCCGTTAGAGAGTGGTGCATTTCCCCTTCCTGATCTCTTTTCAGATATCAATCCACAAATTACAAGTGAACATCAATTTTATGAACAAATTCATCAACTTGATGGGAAAATAATTGTTGATACTTTTCAATCTGATCCAAGCTTTGAGAAGTTCCTCATATCTTCTCAAGGGGTGCGCTCTGCCCGTGATGCTAGATTCTGCCAATCTGCTGATTGGTTAGCTAAACAGAAAGAAGAACTGGATGATGCCATGGTTTCTGATACAGGTCCTGTCAATCTGCTAAATATGCATGAAGAACAAGTTCTTGATTCTTCCTTGACCAAGGCAGCTGTTTCTTCCAAGAGGCAAATTGAGGTTGACTTGGTCTATGATGATGCAAATGGCATTGATAGTAAAGTTGGAGTGGCTTTTAATTGCAATCAATTTGGGAATGATTCTGCTGTTCAATTTAAAGCAGATAATAGAGATAGCAACCTAAATGATGATAAAAGTGAGAAAGTTAAGTCAGTACTGGGTGAGGGCGCAGAATGGGAAATTCAATGGGAGGATCTTCATATCGGTGAGCGTATTGGTATAGGTTCTTATGGTGAGGTTTACCATGCTGACTGGAAGGGCACGGAAGTTGCTGTGAAGAAGTTTTTGAACCAAGACTTTTCTGGTGATGCGTTGGCTCAGTTCAGATCCGAAGTTGAGATCATGTTGAGGCTACGGCATCCGAATGTTGTACTTTTCATGGGAGCTATTACTCGGCCACCACATTTTTCTATATTGACAGAGTTTCTTCCAAGAGGGAGTTTATATAGGCTATTGCATCGACCCAATTTTGAACTTGATGAGAAGAGTAGGTTGCAAATGGCTCTTGATGTGGCTAAGGGTATGAATTACTTGCACACAAGCCATCCTCCCATTGTTCATCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCACCATACCTTTCTGTCCTCAAAATCTTCTGCTGGAACGCCCGAGTGGATGGCACCAGAAGTATTAAGAAATGAACCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATTTTGTGGGAATTGGCTACTGCAAGGATCCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGCGCTGTTGGATTCCAAAATCGACTGCTAGAAATTCCTGAAGATATTGATCCAATGGTAGCACAAATAATACGCGACTGTTGGCAAACGGAGCCACACTTGCGGCCATCATTCGCACAGCTTATGTCTCGTCTCCGCCATCTTCAACATCTGGTTGTGAAAGATAGGAGCCCAACGCAATAA 2772 0.4351 MSKMKHLLRKLHIGGGINEPHRLPDTRPVITPSPVPNLVSSSSTLASNTVGTVRPNESVADRTDIDGAVGICGDKGADFSLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGSAASVTDTAAIVQFQSLRYWNYNVIDYEEKVMDGFYDLYGFSSNLTERGKMPLLVDLQTTSLSENVGCEVILVNRMVDIRLKQLEKKAFALSKDCCLSEQGLVSSGLLQKLADIVVNRMGGPVSDPDEMLKKWSARSHELRDSLRTIVIPLGYLDVGLSRHRALLFKVMADRINVPCMLVKGSYYTGTDHGAVNLIRADDGSEYIIDLMGAPGALIPTEVPSSQLQNYSFLETGGAEIAELPNNAHLIHDGGTGVLAVTSDNERTSTVGRAQSEQLLNVDSQGTMDARNQGGINQTERFEHDLGNLHQSMHISCESTSHIEAPSAEKMQVKNLSEYLLSAAKKPELVQKLQSVPLESGAFPLPDLFSDINPQITSEHQFYEQIHQLDGKIIVDTFQSDPSFEKFLISSQGVRSARDARFCQSADWLAKQKEELDDAMVSDTGPVNLLNMHEEQVLDSSLTKAAVSSKRQIEVDLVYDDANGIDSKVGVAFNCNQFGNDSAVQFKADNRDSNLNDDKSEKVKSVLGEGAEWEIQWEDLHIGERIGIGSYGEVYHADWKGTEVAVKKFLNQDFSGDALAQFRSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFELDEKSRLQMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNPMQVVGAVGFQNRLLEIPEDIDPMVAQIIRDCWQTEPHLRPSFAQLMSRLRHLQHLVVKDRSPTQ 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1306 923 Gene3D Transferase(Phosphotransferase) domain 1 735 919 - -
Lele27g1306 923 ProSiteProfiles Protein kinase domain profile. 656 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1306 923 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Lele27g1306 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Lele27g1306 923 Pfam Protein tyrosine and serine/threonine kinase 656 908 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 FunFam Serine/threonine-protein kinase isoform 1 647 734 - -
Lele27g1306 923 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 PRINTS Tyrosine kinase catalytic domain signature 816 826 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 PRINTS Tyrosine kinase catalytic domain signature 730 743 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
Lele27g1306 923 SUPERFAMILY Protein kinase-like (PK-like) 642 915 IPR011009 -
Lele27g1306 923 CDD STKc_MAP3K-like 662 908 - -
Lele27g1306 923 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 172 912 - -
Lele27g1306 923 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Lele27g1306 923 Gene3D Phosphorylase Kinase; domain 1 649 733 - -
Lele27g1306 923 SMART serkin_6 656 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1306 923 FunFam Serine/threonine-protein kinase CTR1 735 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1306 Lele-ChrLele27 19788336 19795985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1306 1 922 MAP Kinase Kinase Kinase AT5G11850 55.556 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele27g1306 PK_Tyr_Ser-Thr 1e-64 CL0016