Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1303 ATGGGCAGGAAATGCTCATATTGTGGAAACCTTGGTCACAATTCAAGGACCTGTAATATTGTTCAGAGAGGTGGCTTTGATGGTGGCCTCAAGATCTTTGGAGTGCAAATTGATCCTTCACCTTCACCTCTTCTTCTTCTTCCTCCTCCTCCTCCGTCTTCACCTACTAATAATTACGGTTCTGGCATCAAAAGAAGTTTCAGCTTGGACTGCTTGCCGTCTTCCCAGGACACCTTCATATCTACCACACCTTCGTCTTCGTCTTCGTCTTCCTCCTCCTCACGTTCTCTGCTTGAACCCAAGGACAATTCGGATCAGAAAATGTCTGATTCTTATTTAGCCGGCTTAACCCACGAAAGGAAGAATAAAGGAGTGCCGTGGACGGAGGAGGAGCACCAGATATTTCTGATGGGGCTGAAGAAGATGGGGAAGGGTGACTGGAAAGGCATCTCTAAGAATTATGTGAGAACAAGAACACCAACCCAAGTGGCCAGCCATGCACAGAAATATTTCCTCCGTCAGAATCACTCCAATAAAAGAAAGCGCTATCAAACCCTCCTTGATGTGAAGGGACAAAGTAATAACACAGTCGAGCCAGTAACAAGTTCATGCTTTTCTAAGCCCATTGAAGCTGTTGGGGCTTCTGATCAGACTACTATGAACATGGATGTCAGTTGCAGCAGCCACAGCAATAGCAAAAGGATTTGTCTCTCTCGGTGGCTTTCAAGTTATCAGTCACTGCTTAATTGGTCTACCGCCTCTTCAGCAAAGTGCGCCATTCACAGCTTAGAACCTGATTTAGAACTCAAACTAGCGGCTCCGCAGTTTCTTTAA 834 0.458 MGRKCSYCGNLGHNSRTCNIVQRGGFDGGLKIFGVQIDPSPSPLLLLPPPPPSSPTNNYGSGIKRSFSLDCLPSSQDTFISTTPSSSSSSSSSSRSLLEPKDNSDQKMSDSYLAGLTHERKNKGVPWTEEEHQIFLMGLKKMGKGDWKGISKNYVRTRTPTQVASHAQKYFLRQNHSNKRKRYQTLLDVKGQSNNTVEPVTSSCFSKPIEAVGASDQTTMNMDVSCSSHSNSKRICLSRWLSSYQSLLNWSTASSAKCAIHSLEPDLELKLAAPQFL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1303 277 FunFam transcription factor MYB1R1 125 176 - -
Lele27g1303 277 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Lele27g1303 277 MobiDBLite consensus disorder prediction 78 108 - -
Lele27g1303 277 SMART sant 123 173 IPR001005 -
Lele27g1303 277 PANTHER TRANSCRIPTION FACTOR KUA1 3 223 - -
Lele27g1303 277 CDD SANT 126 171 IPR001005 -
Lele27g1303 277 MobiDBLite consensus disorder prediction 78 99 - -
Lele27g1303 277 Pfam Myb-like DNA-binding domain 126 171 IPR001005 -
Lele27g1303 277 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Lele27g1303 277 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Lele27g1303 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 175 IPR017930 -
Lele27g1303 277 Gene3D - 127 176 - -
Lele27g1303 277 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1303 Lele-ChrLele27 19763924 19764974 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g1303 Myb_DNA-binding 1.3e-12 CL0123