Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1302 ATGATTGCTGATCTCCGTTTTCTTCCTCCCCCTCAACTCCTCCTCCTTCCTCTTCTCCAGCAACCTGCGTGCTTAAAGTCCACGTTGGCCACCCCCAGACAGACATTCATGGCCTCATCAGAAGCACGCCCTCAGGGTCTAACACCAGAGGAATTTGCAGAACTCGAATCCATCATCCAAAAATACCACAAATTCGAGCCATCCCCCAACACGTGCACTTCCATTATAACCCAACGAATCGAGGGTCCGGCTCGCAGAGTCTGGCCTCTGGTTCGGAGCTTCGACAATCCTCAGAAGTACAAGCACTTCATCAAGAGCTGCAACATGAAGGGTGACGGCGGCGTTGGCAGCATCCGAGAGGTCACCGTCGTCTCCGGGCTCCCGGCGTCCACGAGCACCGAGAGGCTCGAGATTTTGGACGACAGCAAGCACATACTCAGCTTTAGGGTTGTGGGCGGCGAACACCGGCTCAAGAATTACCGGTCCGTCACGTCGGTGAATGAGTTCGAGAAGGAAGGGAAGGCATATACGATTGTGTTGGAGTCGTATATAGTGGACATACCGGAGGGCAATACTGGAGAAGATACGAAGATGTTCGTGGACACTGTGGTGAAGCTCAACCTGCAGAAACTTGGGATCGTCGCCATGGCCACGCCGCTTCCTCAAGATAATTAG 675 0.5363 MIADLRFLPPPQLLLLPLLQQPACLKSTLATPRQTFMASSEARPQGLTPEEFAELESIIQKYHKFEPSPNTCTSIITQRIEGPARRVWPLVRSFDNPQKYKHFIKSCNMKGDGGVGSIREVTVVSGLPASTSTERLEILDDSKHILSFRVVGGEHRLKNYRSVTSVNEFEKEGKAYTIVLESYIVDIPEGNTGEDTKMFVDTVVKLNLQKLGIVAMATPLPQDN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1302 224 CDD PYR_PYL_RCAR_like 72 211 - -
Lele27g1302 224 FunFam Abscisic acid receptor PYR1 35 224 - -
Lele27g1302 224 Pfam Polyketide cyclase / dehydrase and lipid transport 77 211 IPR019587 -
Lele27g1302 224 Gene3D - 34 223 IPR023393 -
Lele27g1302 224 PANTHER - 71 212 - -
Lele27g1302 224 SUPERFAMILY Bet v1-like 72 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1302 Lele-ChrLele27 19756286 19756960 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1302 27 19756286 19756960 Lele01g0771 01 4470160 4470723 CCT
Lele27g1302 27 19756286 19756960 Lele02g0748 02 4505877 4506440 CCT
Lele27g1302 27 19756286 19756960 Lele03g0765 03 4464878 4468351 CCT
Lele27g1302 27 19756286 19756960 Lele04g0766 04 4663881 4664444 CCT
Lele25g0773 25 4928598 4929164 Lele27g1302 27 19756286 19756960 hybridization