Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1301 ATGTTCCTGAGATCCCCTGCCACGAACAGAGGTTTCAACAGAGAGAATCCGGATATTTTGATGGCGATGACTGCAGCGAAGCAGATAATAGGAGTTTCTCGTTTTCTGGGTCTTGGCTTCTTGAAGGAACTTAAAAAGCTTCCTGTTCATGCAAAGAAACCAACGCCCTTATGGTATTGTATTGGCGCTCTTGGTTCTCGCTGGAAATATTTGCAAGAAGACTTCGTTTTGGCTCGATTAGGAGAAGGAGAGAGCAAAGAAGCCACTTGTAAGAATTCAAACAGAGTGATGGAGAATGATATGTTTGATACTCCGATGGACATGGCTGGTCGAAGTTCTGCTGTGTTAGATGAAATTCCACTCATTGAGGGCTATTTATTTGACCAAACCCGAATCATGAATGGAATTTCAATGCTTGCTGCTGGAATGCAAGATGAACTCATAAGTAATGTCCATTCGGATGTTCCTGTAATGAATCCTGCCTGCATTGCTGCTGATCTTAATTCCATGGTTCCATCTCAAGGAAAGAACTTTTTAGCCCCATGTCCCCGAAACAACAGTGTGTTTCAAGATCAACAATCTGGAGCCACAATCCCTACTGCTGCAAGATTTGGTCTTCAAGAAAACTTTGAGAAATCAGCAGCTCTGTCTCCTTCAGTAGTCTGTTCATCGGAGGCACTGGCACCATATATGTTAAGCAATTGGCAGGACAATTCAAACTCTTTGCTTGCAGCTTTTGGAGATCATGTGTACGATGAAGTACCTGGTACTACTACTAGGTTCCAGACTTGTTCGTCTCCAGCAAACCTGGATCCAAATGCATGGACATCTTCAAATGTTGCAGCAAACTTGACCCATCATGGTTATGGTTACCAGAATTTCAGGAATGAGCTCTCATTAAGTCTTACAACATCTCCCACCACAGGTCAGTGCTCAGAGGTGAGTTCTGATAGCATGGAACAAGCTTTCTGTAGCAGTAGACATGTGAATTTTTCACAAGCAATATTAGGTTCCAGATATCTTAGTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTTGAAAATACAGAACGGACAAATTGTTCAGCTGTTTGTAGTAGTAGAGCCAGAGCCAGAGCAGAAGGGAGTATATCAACCTCAGATCTTCCATCCAGGAGAACGATAGAGACAACAAATCACAATGCAGATTCTGTGTTTGAAGCTCAAGTGAATTCATTTGCAAGACACGATGCTGCCGAATCAAAGAAATCCCAGCTTCTGACACTTCTACAACTGGTGGATATTCGAAATAGTCAGTGTTTGGATGCGATACATACTGTTGTATTCGCATTTCATGCTGCTACAGAGTTGGACCCGCACGTTCATGCACAATTTGCACTTCAGACAATCTCCATGTTGTACAAGGATTTGCGTGAGAGGATAAGCAATTATATCCTTTTCTTGGGAGAAAAGTTTAACAACTCAGGCTCAGAAGAAGAGAAGGAAAAGTCGACGGAAGCTTTAATCATCGAAAAGCACTGGGCTCTGCAGCAATTGAAAAGGAAAGAGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAACGATCTGTCTCCGTTCTACGGGCTTGGATGTTTAAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAATTACTTGCAGTAAAAAGTGGATTGACTAGAAGCCAGGAGCTGTGCATAATGCTCTGTGTAGTTGGGGTGGCATGCAGTGTCACTGACTATTTTGAAAAGCAGACTTCCACTCATGCTGGTCTAAGACTTGCATCAAACAAAATAGAATATCAGTAA 1824 0.4265 MFLRSPATNRGFNRENPDILMAMTAAKQIIGVSRFLGLGFLKELKKLPVHAKKPTPLWYCIGALGSRWKYLQEDFVLARLGEGESKEATCKNSNRVMENDMFDTPMDMAGRSSAVLDEIPLIEGYLFDQTRIMNGISMLAAGMQDELISNVHSDVPVMNPACIAADLNSMVPSQGKNFLAPCPRNNSVFQDQQSGATIPTAARFGLQENFEKSAALSPSVVCSSEALAPYMLSNWQDNSNSLLAAFGDHVYDEVPGTTTRFQTCSSPANLDPNAWTSSNVAANLTHHGYGYQNFRNELSLSLTTSPTTGQCSEVSSDSMEQAFCSSRHVNFSQAILGSRYLSGIQEILAQIARYSLENTERTNCSAVCSSRARARAEGSISTSDLPSRRTIETTNHNADSVFEAQVNSFARHDAAESKKSQLLTLLQLVDIRNSQCLDAIHTVVFAFHAATELDPHVHAQFALQTISMLYKDLRERISNYILFLGEKFNNSGSEEEKEKSTEALIIEKHWALQQLKRKEHQLWRPQRGLPERSVSVLRAWMFKNFLHPYPKDAEKQLLAVKSGLTRSQELCIMLCVVGVACSVTDYFEKQTSTHAGLRLASNKIEYQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1301 607 CDD homeodomain 523 568 IPR001356 GO:0003677
Lele27g1301 607 Gene3D - 529 579 - -
Lele27g1301 607 Pfam Associated with HOX 335 478 IPR006563 -
Lele27g1301 607 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 270 568 - -
Lele27g1301 607 SMART prehox3 329 479 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1301 Lele-ChrLele27 19750804 19753683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1301 296 568 Homeobox Transcription Factor Family AT4G32980 50.877 8.56e-79 255