Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1281 ATGGAAGGGGACCTCATCCTCAGCATCGTGAAAGCTACTCATTCAAATGGCCAACTTGCTCTCATTTCTATTATCTCAGTAACCGAAACTTCGAAAAGTTACAAAGCGGCCAGCGAAGCAATTTGCAAGAGCCAAGGTCTTCGTCGCCGCCGTTCCTGTCCTCCTCCTTCGCCGTCTGGAGGAGTCTCGGGTCCGCATTCCGACATGGCAGATCAGTACACTCTTTGTTGGGTCGTTTTCTCTGGTTTGCTCGCCTTGGTTGCCCTCTACAATTTGGTTTTTGCTAGGAAGAGCCGTATTGTTTCCTCCGCGGCTTCACCTCAGTGCATGAATAGCATAACCACCGCTGCCGGAGGATGCGGATCCATTGACAGCAGTGATAATGTCGATGTCATTATCGTAGGAGCTGGTGTTGCTGGCTCTGCTCTTGCGCACACTCTTGGCAAGGATGGACGCCGAGTACATGTTATAGAAAGAGATTTGAGAGAGCCTGACCGAATTGTTGGGGAGTTGCTACAACCTGGAGGCTATCTCAAACTAATTGAGCTCGGGCTTGAAGATTGTGTGCAGGAAATTGATGCTCAGCGAGTGTTTGGTTATGCTCTTTACAAGGATGGAAGAAATACTCGACTCCCTTATCCATTGGAGAAGTTTCACTCAGATGTTTCTGGAAGAAGCTTTCACAATGGACGTTTTATTCGGAGGATGAGGGAGAAGGCTGCCTCCCTTCCCAATGTACAATTGAAGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATTAAAGGTGTGCATTATAAGACTAAAGATGGCCAAGAATTTTCAGCGTATGCTCCTCTCACCATTGTTTGTGATGGGTGTTTTTCAAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTGGACGTTCCCTCTTGTTTTGTTGGTTTGATATTGGAAAACTGTGAACTTCCGTATGCAAACCATGGCCATGTTATACTAGCAGATCCTTCACCAATTTTGTTCTATCCTATAAGTAGTACGGAGATTCGCTGTCTGGTTGATGTCCCTGGTCAGAAGGTTCCTTCAATTGCAAATGGTGAAATGACCAAGTATTTGAAGACAGTGGTAGCTCCACAGGTCCCATCTGAGCTTTATGATGCCTTCATAGCTGCGGTGGACAAAGGCAGTATGAGGACAATGCCAAACAGAAGCATGCCGGCAGCCCCTTATCCTACTCCCGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTTACTGGGGGTGGAATGACTGTGGCACTGTCTGACATAGTGGTGCTGCGGAATCTTCTCAAGCCTTTGCGTGACCTAAATAATGCATCCACGCTTTGCAAATATCTCGAGTCCTTCTATACCTTGCGGAAGGCGATTAAAATGCCTGATGATTTGAACTGGCAGCCAGTGGCATCCACCATAAATACGTTGGCGGGAGCCCTATACAAGGTTTTTAGTGCGTCTCCTGATAAGGCGAGGAGTGAAATGCGCCAAGCATGCTTTGATTATCTAAGTCTAGGAGGCGTATTCTCGGAAGGGCCAATTTCTTTGCTTTCTGGATTGAACCCCCGCCCCTTGAGCTTGGTTCTCCATTTCTTTGCTGTTGCAATATACGGTGTTGGCCGTTTGTTGATTCCATTTCCGTCGCCCAATCGGGTTTGGATCGGAGCACGGTCAATATCTGGTGCTTCAGGAATAATCTTCCCCATAATTAAGGCAGAAGGAGTGCGCCAGATGTTCTTCCCTGGGACCGTCCCAGCTTATTACAGGACAACTCCGTCTAAACAGGAATGA 1821 0.4756 MEGDLILSIVKATHSNGQLALISIISVTETSKSYKAASEAICKSQGLRRRRSCPPPSPSGGVSGPHSDMADQYTLCWVVFSGLLALVALYNLVFARKSRIVSSAASPQCMNSITTAAGGCGSIDSSDNVDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQRVFGYALYKDGRNTRLPYPLEKFHSDVSGRSFHNGRFIRRMREKAASLPNVQLKEGTVTSLLEENGTIKGVHYKTKDGQEFSAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILADPSPILFYPISSTEIRCLVDVPGQKVPSIANGEMTKYLKTVVAPQVPSELYDAFIAAVDKGSMRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNNASTLCKYLESFYTLRKAIKMPDDLNWQPVASTINTLAGALYKVFSASPDKARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPNRVWIGARSISGASGIIFPIIKAEGVRQMFFPGTVPAYYRTTPSKQE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1281 606 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 407 422 - -
Lele27g1281 606 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 422 438 - -
Lele27g1281 606 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 - -
Lele27g1281 606 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 130 152 - -
Lele27g1281 606 Pfam NAD(P)-binding Rossmann-like domain 133 159 - -
Lele27g1281 606 Pfam Squalene epoxidase 280 563 IPR013698 GO:0004506|GO:0016020|GO:0050660
Lele27g1281 606 PANTHER SQUALENE MONOOXYGENASE 108 602 IPR040125 GO:0004506|GO:0016126
Lele27g1281 606 FunFam Squalene monooxygenase 2 123 514 - -
Lele27g1281 606 Gene3D - 122 510 IPR036188 -
Lele27g1281 606 SUPERFAMILY FAD/NAD(P)-binding domain 129 467 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1281 Lele-ChrLele27 19590751 19595243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1281 112 606 Miscellaneous Gene Families AT1G58440 77.867 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0799 01 4634526 4635833 Lele27g1281 27 19590751 19595243 CCT
Lele02g0771 02 4706746 4708059 Lele27g1281 27 19590751 19595243 CCT
Lele03g0792 03 4631975 4634497 Lele27g1281 27 19590751 19595243 CCT
Lele04g0789 04 4837115 4838428 Lele27g1281 27 19590751 19595243 CCT
Lele25g0795 25 5077841 5083163 Lele27g1281 27 19590751 19595243 hybridization
Lele26g0807 26 5136283 5140092 Lele27g1281 27 19590751 19595243 hybridization