Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1279 ATGGGTGGTCATGAAAATGCCATGGGGTTTCAACATGGACAAGAGACAATTCTGAATTGCACGTCATCGGGTTTGAGCAACATTGTTTCTGAAATCGGAATGAGCTCTGTGTCTATGGCCGAGCCTCCTGTTGTGACTAATCCTTTTCTTGGGTCTTCTTCTTCTACCTGGGATCCTCTTGTTTCCCTGAGTCAGACTCAAACTTTTGGAGGCTCTTCCATGGTTTCTCACAGCGAGTTTGGCAGCTCATCTTACCCTCTTGTGTTGGAAAATCAGGGAATGAGTAGCACATCTCACCTTGTTCAATACATGTCCGATTCTAATTTCTCTGTTCCTTCCTATGCAAATGGAAGCTTCTCCGAAATGGTTGGCTCTTTTCCCCAACATGGCTGTTCTGATTTAGCTAATACAAGGTATGGCCCAAGTTATAACCAAAACGAGGAGGCAGCCATGAAAAGGGCCCCATTAAATGGTTCGCAATCTCAGCTTGAGGATCCAACTCCTGAAGAAGGAGCCACAGGATCTGCACCTAATGGAAGTAGAAGAAAACGAGGGCTTGATCACAATCCTTCGTTCAGTCCAAGAAAGAATGCTGAAGGGGAACCGATGAAGGATTCTTCTGGGAAGAGTTCCGATGGGGCAAAAGAACAAGATGAGAAGAAACAAAAGGTCGAGCAAAACAATACTAGTGTAGATTTGCGTGGTAAGCAATCATCAAAGCAAGCTAAAGACAACTCTCAAAGTGGAGAAGCTCCCAAAGAAAATTTCATCCACGTGAGGGCTCGAAGAGGTCAAGCTACGAACAGTCATAGCCTTGCAGAAAGGGTAAGAAGAGAGAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTGATGCTGGATGAGATTATTAACTATGTGCAATCGCTGCAGCAACAGGTTGAGTTTTTGTCAATGAAACTTGCCACCGTGAACCCAGAACTGAATTTTGATGTAGAACGGATCCTATCCAAAGATATTCTTCAGTCGCGCATTGCAAATGGGACTATTGGTGGATATGGCATGAACTCCCCTCACACGTTCTCTAGTGGAAGTTTTCAGGGAACTCTTCCAGGACCAGGCATTCCCAACACATCACCATTCCCTCCTTTGCCTCAGAGTGTTTTGGAGCATGAGTTCCAAAACTTGTATGGAATGGTATACGATTCCAGTACAGCTCTGGACAATGCGGGACCCAGTGGGAGGTTGAAAACAGAGTTGTAA 1278 0.4507 MGGHENAMGFQHGQETILNCTSSGLSNIVSEIGMSSVSMAEPPVVTNPFLGSSSSTWDPLVSLSQTQTFGGSSMVSHSEFGSSSYPLVLENQGMSSTSHLVQYMSDSNFSVPSYANGSFSEMVGSFPQHGCSDLANTRYGPSYNQNEEAAMKRAPLNGSQSQLEDPTPEEGATGSAPNGSRRKRGLDHNPSFSPRKNAEGEPMKDSSGKSSDGAKEQDEKKQKVEQNNTSVDLRGKQSSKQAKDNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGTIGGYGMNSPHTFSSGSFQGTLPGPGIPNTSPFPPLPQSVLEHEFQNLYGMVYDSSTALDNAGPSGRLKTEL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1279 425 MobiDBLite consensus disorder prediction 154 256 - -
Lele27g1279 425 CDD bHLH_AtBPE_like 255 340 - -
Lele27g1279 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Lele27g1279 425 SMART finulus 271 321 IPR011598 GO:0046983
Lele27g1279 425 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 153 361 IPR024097 GO:0006355
Lele27g1279 425 MobiDBLite consensus disorder prediction 198 227 - -
Lele27g1279 425 FunFam Basic helix-loop-helix transcription factor 262 334 - -
Lele27g1279 425 Pfam Helix-loop-helix DNA-binding domain 268 316 IPR011598 GO:0046983
Lele27g1279 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 333 IPR036638 GO:0046983
Lele27g1279 425 MobiDBLite consensus disorder prediction 228 252 - -
Lele27g1279 425 Gene3D - 262 336 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1279 Lele-ChrLele27 19575262 19577398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1279 1 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.244 1.03e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele27g1279 HLH 4.5e-06 No_clan