Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1275 ATGCTGCTTCACCAGAGAAACTCTTTGCTGAGATCTAATACTTCTCCCTTCTCTGATTCTCAAATGCTCACTTTCTCTTCTACCAAATCGGAGTCTCAGTTAACGGACAAGGCCTCCACGAATGCCGCATTGCCCTTTCCGTATCACCAACTAGCCGCTTACACCAGGAATACAGATAAATTACTTCTGTCCACTGCCATACCTCTTCTCACTTTTCTTTTCTTTTTTTCCACACCTCCTTACAAATCATTTTCCATGCAGTTTTGCTGTTACGGCTCTGGAGGCATGCACGGCGTTTTAACAACAGCCAGAGGGCTATTCACTCCGTCGCAGTGGATGGAGCTGGAACACCAGGCCTTGATCTACAAGTACATCACTGCAAATATGGCCGTACCTTCTCATCTCCTCATCCCTATCAGAAAAGCTCTCGATTCTGCTGGCTTCAGTAACTTTTCCAACGGACTTCTCACACCCAATGCGCTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAACCGGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGATGCCGTTGTGGACCAGAAGTACTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCTGGCGCCACCACTACCAATAATGCCTCAAAGCTCATCCCTAATGCTTCCTCCTCTGCCTCAGTAGTGGTGCCAGGCAATGCTGCTTCCAGCACCCTTTCCTTTGCCCGTCATCAATCCAAGAATTTGCAGCCTCTTTCATCTCATACTTCTGCCCCAACCAACATCGACAGAATGTTTATGAACAACAAGGAGAATGCTAATGAGAGAGTGCAGGACGGTTCTGCTTTTCCGATGCTGCCTCCCACCCTTGATCTGAAGCCCAAGGAAAACCCTTTTATGATACAAAAGGAGCAAATCCCATACCAAGAATCGTCAAGGAATGAGTTTGGGTTTGTCACTTCTGACTCTCTACTCAACCCTTCTCATAAAAGCTTTGGTTCTTCACAGAACCCCTCTTACAGAGACGACGAGTCACAGCAATCCCTTCGTCATTTCATGGATGACTGGCCCAAACTTGACATGCAATCAGATAGGACCCAGCTTTCAATATCTATCCCCATGGCCTCCTCAAATTTCATGCCATCCACTTCCTCTCCTTCCAATGAAAAAGTCACATTGTCACCTCTTCGACTATCCAGGGAGCTAGATCCAATTCAAATGGGTTTGGGGGTGGGAATTGGTCTGAATGAATCAAGTAATAGGCAGGCAAATTGGATTCCAATTGCTTGGGAAAGTTCCATGGGAGGTCCTCTTGGCGAGGTTCTTCATCTTAGTAACAACACAAGTGATTGCTCCAAGAACTCATCCGCTCTCAACCTCATGACAGATGGTAGTTCTTCCTTAGGTTCATCTCCTACGGGAGTCTTGCATCAGACTGCGTTTGGATCAGTTTCCAATAGCAACTCAGGGAGCAGTCCGGTGGCTGAGAATAATAAAGGACTCGAAGGGGCCAGCTTGGGCAATGACCTGCTAGGTTCCACTCTTGGCAATTCCTCCTCTTTGCCCAACTTTTTAAATTGCCCTTACAATTGTGTAATCTCTGAATTTGCAAAATCTGGTTCCGTCAGTGACGTTGGTTGGTTTATGAAGTGGATGATGATGAGGTCCAGGCACTTGAGAGAATACATCCGTATGATTTATCCAACAGGTCCAAGCGGCATCTGGGTATCATGTTCATTGCAAGCGTTTCACTTTCTTTCCACACAAAAATGCTTCAAGTCATCTACTTTGCCCCTTCATGAATCTCCTCCTAGTGGTGGTGTTACTGTTTAG 1890 0.4704 MLLHQRNSLLRSNTSPFSDSQMLTFSSTKSESQLTDKASTNAALPFPYHQLAAYTRNTDKLLLSTAIPLLTFLFFFSTPPYKSFSMQFCCYGSGGMHGVLTTARGLFTPSQWMELEHQALIYKYITANMAVPSHLLIPIRKALDSAGFSNFSNGLLTPNALGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSGATTTNNASKLIPNASSSASVVVPGNAASSTLSFARHQSKNLQPLSSHTSAPTNIDRMFMNNKENANERVQDGSAFPMLPPTLDLKPKENPFMIQKEQIPYQESSRNEFGFVTSDSLLNPSHKSFGSSQNPSYRDDESQQSLRHFMDDWPKLDMQSDRTQLSISIPMASSNFMPSTSSPSNEKVTLSPLRLSRELDPIQMGLGVGIGLNESSNRQANWIPIAWESSMGGPLGEVLHLSNNTSDCSKNSSALNLMTDGSSSLGSSPTGVLHQTAFGSVSNSNSGSSPVAENNKGLEGASLGNDLLGSTLGNSSSLPNFLNCPYNCVISEFAKSGSVSDVGWFMKWMMMRSRHLREYIRMIYPTGPSGIWVSCSLQAFHFLSTQKCFKSSTLPLHESPPSGGVTV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1275 629 PANTHER GROWTH-REGULATING FACTOR 5 42 397 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele27g1275 629 Pfam QLQ 107 140 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele27g1275 629 Pfam WRC 176 218 IPR014977 -
Lele27g1275 629 ProSiteProfiles QLQ domain profile. 106 141 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele27g1275 629 MobiDBLite consensus disorder prediction 223 237 - -
Lele27g1275 629 MobiDBLite consensus disorder prediction 498 517 - -
Lele27g1275 629 SMART QLQ_2 105 141 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele27g1275 629 ProSiteProfiles WRC domain profile. 175 219 IPR014977 -
Lele27g1275 629 MobiDBLite consensus disorder prediction 205 237 - -
Lele27g1275 629 MobiDBLite consensus disorder prediction 498 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1275 Lele-ChrLele27 19532547 19536170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1275 86 539 GRF Transcription Factor Family AT2G22840 45.168 5.64e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele27g1275 WRC 5.9e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0801 25 5138629 5141464 Lele27g1275 27 19532547 19536170 hybridization
Lele26g0813 26 5201840 5205096 Lele27g1275 27 19532547 19536170 hybridization