Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1267 ATGTTCGTTCGGGAGTTTCGAGCAGAAGAACTAGGGAGGGCATCAGAAGCGAGACGAAGGCGTCTCAGTGGCGAAGAAGCTAGCTGTCTAGTGCAATCCCATGAGGCATTTCATAGCTTTGTCTGTTTTGCTGAGTTGGTTGGTGAGCTTGGGATCGGGGGAATAGTGCGAAGTACCAGTCTCCAAGCTCTCATTTCCGATCAACATTTGCATTCTAAGATGGACGACGCATATGCCAGATCTATTCCTGAGGTACTCGATTTCTTTGGAGTGGACCCAACAAAAGGTCTTTCTGATAGCCAGGTGGCACAACATGCTAGACTTTTTGGTACAAACGGTATGTCTTTTCCTGCAGGGAGCTCCTTTTTGGAAATTGGTCTTGAAGCAATGATTTGCTTGTGA 402 0.4701 MFVREFRAEELGRASEARRRRLSGEEASCLVQSHEAFHSFVCFAELVGELGIGGIVRSTSLQALISDQHLHSKMDDAYARSIPEVLDFFGVDPTKGLSDSQVAQHARLFGTNGMSFPAGSSFLEIGLEAMICL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1267 133 Pfam Cation transporter/ATPase, N-terminus 79 129 IPR004014 -
Lele27g1267 133 SUPERFAMILY Calcium ATPase, transmembrane domain M 75 130 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1267 Lele-ChrLele27 19462604 19466099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1267 74 112 Primary Pumps ATPases(2) AT1G10130 79.487 1.70e-16 72.8