Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1251 ATGGAGACACTTGGAGTCATCTCTGATGCGGAAATGAGTTGCTTTCGAGGAATATTTGCCTCAGAAGAGCATGATTACTCGCCACAATTTCTTGGCCAAAGCTCATTTCTGCTCGGGGAACATGATCGAATGCTCGTAGGAATAGAATCTGCATTTTGCTCTGCTCCTGAAGCTGGGGAAAATGAGTTCATGTTTAATTCTTTAGATGCTCTCAACCCAGATTTGCAGTTTATTTCTCAAGAAAGTAGTTTCAGTAGTAGCTGTAATGGTGATGCTTTCTTCGTTGCCAACCCGGGTCATATGAACTACTATCTCAGTGATCCTAATCAGGCACTAGCAAATGATGCCTGCATGTTCATGAATGTTCGCATGATGCATGAAAAAGTCACTGGCAGTTTCATCCCATCGCCAGGAAACGTTTTGGTGGACGAAACTGTTGGCTTTAATGAAGACAAGAGAGGGGACAAATCGGAGAATTCTAATCAAAGTCAAGCTGAATTAGCAGCTTTTGCTGCCGAACAAATGCACCTGAAAAGGAAGTTTGATGTGCCAGAACTGGAGGCCTCAGCAGAAGATAAAATAAACATCAGCTCATCTGAGAACCAGAAGAAGAAACCTCGTGTTTCAAGAGATGTTCAAAAGAGTACGAAGAATGCACGGCTAAAGAAGAACCAAAAGGTTGCAGGAAGTGGCTATGGGGCAGAAGAGACTGAGACAAGATTACATGGACAGAGCTGTAGTACTTATAGCTTAGAGGACGATAATGCTTCTCAGGAAAATAGTGGAGGACCTTCGTCTGAGTCTAAACCGCTAGAGACTCACAACACAAATGGGAAGACCAGAGCCAGTAGAGGATCCGCAACAGATCCTCAGAGCCTTTATGCCAGGAAAAGGAGGGAGAGAATAAATGAACGTCTGAGAATCCTACAGAATCTTGTTCCAAACGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCCATTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTAAGTTCTGATGACCTGTGGATGTATGCTCCAATTGCTTATAACGGAGTTGACATTGGATTGAATCTCAGCCGCAATATTTCTCGAGCAACGAGAAAAAAATTGCTAGATATATGTGCCATTTACAGTCATGAAAATGAAGAGTTGACAAGATTGCTTGTCAGAAATGCTTTGAATGCTCAGCCTTGGATCCATGATAATCTGACAGCCATAATATCACATTTTCTTGGAATTGCCCACACAATGCATGATGTTCATCATTGGAGTCTTATACTGTTTGCAGTTATTCACAATTTCACCAGTAATGAACAATCGATTCATGAATGCACAAAACAAGTCTTATTTTCTTCCCGAAAACTGGATGATCACAGTGGTGCTCAGATTCAAGCTGATCTGCTTGAGGTAGTCGACTTTATAAATGATGCAATTGTATCAATGGATGCTTTTGTTAGTGCATGCGAACTGGCAGCCGTATTTTTTTCATGCCCATTTGAAATAAGTTCTGGAAATGAGGTGCTGCTAAGCTTTCTTGCTAGATTGCATGATTCACTACTTCCATCCTTGCTAAAGGGCTTCCATACCATTGTTGTTGACGAACAAGATGGAAGACTGTCGAATGGTCGAATCTTGTTAGATAGTTACCCTCTTCCATCTGCTACAAAAATGTTTCCTGCCACTGTGGAGGACCCAGTTATTAGGGCAGATATTCTGGTTCAAACATTTAGAGAGATCAATGCAGTTTCACTACAATTACAGGAAAACCAGCAGAAGGAAACATTTATTCAACATATTGAAAAGAGTTGCAATATTTTGAAAAGAGTTGAAAGCTTGCGGGATAATGTTCCTGTATATATCTGGGATTATGAATTCTCCAAGAGATTTGTGCATGTCTTGAAGTCTATTATCATAATCCGGAAGAGGTTATTCAAAGGATTTTGGAGGGAACCAACCCTCCATGAAGATCTGCAATGCTTGGACAGATCGCTTGATATAGTACAACCAGCCCAGTCTACTACTGTGAACAGAAATGATAAAGGAAAAGGTAAACTGATAGATTCTATGTCAATGCCCTCAAATACTGCAGCAGCTTTTATTGGGAAGCAACAGACAGAGGGATCATTGGTTTCATCCTCCGAATCACTTGGAAAATATGTGAGGAAATCCAAAGCTGACTTCTCAAAATGGGGCTCCAGGAAAAAGCCCCAATACCATGTCAAAGATGGCAAGAATTACAGCTACAAAGTGGCAGGTGCGATAGCAGTTGCAAATTCAGATGAGGCTTCACTAGTTAACCAAGCTCAAGAAGAATTAATATATGGTCTCGGACGCGGTGGCAACCTTCCTCTTGGTGCGGTAAAGAAGCTGACAGATTTCCACAAGGATGACAACGACCAGTCCCGAGGTCCTGAAGCAGAAGGGAAAGGGAATCTGGGCAATTCTGGGGGTAGGGGGAGGGAGGAAGGGGGAAAGTCAAGTGCTTCTCATGGGCAGCAGGACAAACAATCCGATGCCTCGGAGAGCGAAGGAAGAGGAAGAGGCAGAGGAAGGAGGGGAGGAAGGAACAACCATTACCGAAAGGACCGAGCCATGAAGAAGCACTTTTTATGGGTTGAGCGGTTATTAGAAGCATATGCGAGTCTCATATTTCTGCCTGGGGGAGTTGAACTCGTTTACTGGCCCACAAACGGATAG 2715 0.4262 METLGVISDAEMSCFRGIFASEEHDYSPQFLGQSSFLLGEHDRMLVGIESAFCSAPEAGENEFMFNSLDALNPDLQFISQESSFSSSCNGDAFFVANPGHMNYYLSDPNQALANDACMFMNVRMMHEKVTGSFIPSPGNVLVDETVGFNEDKRGDKSENSNQSQAELAAFAAEQMHLKRKFDVPELEASAEDKINISSSENQKKKPRVSRDVQKSTKNARLKKNQKVAGSGYGAEETETRLHGQSCSTYSLEDDNASQENSGGPSSESKPLETHNTNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGVDIGLNLSRNISRATRKKLLDICAIYSHENEELTRLLVRNALNAQPWIHDNLTAIISHFLGIAHTMHDVHHWSLILFAVIHNFTSNEQSIHECTKQVLFSSRKLDDHSGAQIQADLLEVVDFINDAIVSMDAFVSACELAAVFFSCPFEISSGNEVLLSFLARLHDSLLPSLLKGFHTIVVDEQDGRLSNGRILLDSYPLPSATKMFPATVEDPVIRADILVQTFREINAVSLQLQENQQKETFIQHIEKSCNILKRVESLRDNVPVYIWDYEFSKRFVHVLKSIIIIRKRLFKGFWREPTLHEDLQCLDRSLDIVQPAQSTTVNRNDKGKGKLIDSMSMPSNTAAAFIGKQQTEGSLVSSSESLGKYVRKSKADFSKWGSRKKPQYHVKDGKNYSYKVAGAIAVANSDEASLVNQAQEELIYGLGRGGNLPLGAVKKLTDFHKDDNDQSRGPEAEGKGNLGNSGGRGREEGGKSSASHGQQDKQSDASESEGRGRGRGRRGGRNNHYRKDRAMKKHFLWVERLLEAYASLIFLPGGVELVYWPTNG 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1251 904 MobiDBLite consensus disorder prediction 240 290 - -
Lele27g1251 904 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 286 351 IPR036638 GO:0046983
Lele27g1251 904 MobiDBLite consensus disorder prediction 197 218 - -
Lele27g1251 904 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 286 335 IPR011598 GO:0046983
Lele27g1251 904 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 375 621 - -
Lele27g1251 904 FunFam Basic helix-loop-helix transcription factor 287 344 - -
Lele27g1251 904 Pfam Helix-loop-helix DNA-binding domain 296 336 IPR011598 GO:0046983
Lele27g1251 904 SMART finulus 292 341 IPR011598 GO:0046983
Lele27g1251 904 CDD bHLH_AtIND_like 287 349 - -
Lele27g1251 904 MobiDBLite consensus disorder prediction 192 297 - -
Lele27g1251 904 Gene3D - 288 344 IPR036638 GO:0046983
Lele27g1251 904 MobiDBLite consensus disorder prediction 800 866 - -
Lele27g1251 904 MobiDBLite consensus disorder prediction 842 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1251 Lele-ChrLele27 19355120 19362463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1251 197 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 58.333 1.24e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele27g1251 HLH 5.6e-08 No_clan