Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1241 ATGATTGCGGCACTAGCAAAGGCTGACTTATTTTTGAGTTCATATTCAATATCAAAATTTTCTGCTACAGATTGCATTCTCGATAATGATATTGCCAGTCCTGTTCCGACCTCTCTCTTTTTACTCTCATGTTTTTTCTTTTTATTTCTTGAGAATTATGGAGTAAGGAAGCTGGAAGCAGTTTTTGCAGTTCTCATCGGGACAATGGCCCTTTCTTTTGCCTGGATGTTTGGTGACGCCAAACCTAGTGGAAAAGAACTCTTGATGGGTATTTTAGTTCCAAGACTTAGCTCAAAAACAATTCGCCAGGCTGTGGGGGTTGTGGGTTGCGTCATAATGCCTCACAACGTGTTCTTGCATTCTGCTTTGGTGCAGTCAAGGGAAATTGATACCCGTAATAAAGGCCAGGTGCAGGAGGCTCTTAACTACTATACCATTGAGTCAACAGCTGCTCTTTCAGTCTCCTTCATCATTAACATATTCGTCACAACAGTTTTTGCTAAGGGGTTTTACAGTTCAAAGCAGGCCAATAGCATAGGATTGGTTAATGCAGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGGCTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATTACTGGTACATATGCTGGGCAGTTCATTATGGGAGGTTTTCTCGACCTTCGTTTAAAGAAATGGTTAAGGGCATTAATCACTCGAAGTTTTGCAATTCTGCCAACTATGGTTGTAGCTATTGTTTTTAATACATCCGAAACATCATTGGACATTCTGAATGAGTGGCTGAATGTGCTTCAGTCAATGCAAATTCCTTTTGCACTTATCCCTCTGCTCACCTTGGTCTCAAAAGAGCGGGTCATGGGGACCTTTAGGGTTGGACTTGTTCTTGAGGTGAGTATTGCTTATTTTCAGAGGGTAGCATGGACTATTGCTGCGCTGATAATGGTGATCAATGGGTACCTATTGTTAGATTTCTTCCTTTCTGAAGTGAAAGGTCTGCTGTTTGGTTTTGTAGTTTGCTCCTGCACAGCTGCTTATGTGGCATTTATTGTATATTTGATTTCCCTAAGTGGTGCTCTTCCTTCTTCTTGGGTTAATCTACTTACCAAGAGATTTTCTTACTCTGAGGTTTGA 1164 0.4158 MIAALAKADLFLSSYSISKFSATDCILDNDIASPVPTSLFLLSCFFFLFLENYGVRKLEAVFAVLIGTMALSFAWMFGDAKPSGKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSREIDTRNKGQVQEALNYYTIESTAALSVSFIINIFVTTVFAKGFYSSKQANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLDLRLKKWLRALITRSFAILPTMVVAIVFNTSETSLDILNEWLNVLQSMQIPFALIPLLTLVSKERVMGTFRVGLVLEVSIAYFQRVAWTIAALIMVINGYLLLDFFLSEVKGLLFGFVVCSCTAAYVAFIVYLISLSGALPSSWVNLLTKRFSYSEV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1241 387 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 39 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 PRINTS Natural resistance-associated macrophage protein signature 211 230 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 PRINTS Natural resistance-associated macrophage protein signature 104 127 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 PRINTS Natural resistance-associated macrophage protein signature 239 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 PRINTS Natural resistance-associated macrophage protein signature 55 76 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 PRINTS Natural resistance-associated macrophage protein signature 273 292 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele27g1241 387 Pfam Natural resistance-associated macrophage protein 37 303 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1241 Lele-ChrLele27 19303736 19306470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1241 43 367 Inorganic Solute Cotransporters AT1G47240 79.385 0.0 535