Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1238 ATGGAGGCCTGCGCAGCCAAGAGGAGGGCAGAAGCTGCCGCCATTGCCCAGAATGAGTCTTCCAACAAGAAGCGTGTGGTGTTGGCGGAACTTTCAAATTTACCAAATGCTATCTTTCCCTCCATTTTGAATCAGAAATGTCGAAACAAGACCCTTTCATTGGATCATGATTCCAATTTCAAGGACAACAAGTCAGTGCACGTTGATTCTAAGTTAGACGCCGATGCCAAGCTTAACGATTCGCAAAAGACCGATCCTCATGTCTCTCAAATCTACCAATACCTTCACAAAATGGAGATGGAGCCGAATCGAAGACCAATGCCTGACTATCTCGAGAAGGTTCAAAAGAACGTCAGTGCTAACGCTAGAGGAATATTAATTAATTGGTTAGCGGAGGTGGCGGAGGAGTACAGGCTTCTCTCCGACACGCTTCATCTCTCGGTTTCTTACATTGATAGGTTCCTCTCTGCTAATATCGTCAGTAGGCAGAGGCTTCAATTGCTCGGCGTTTCATCCATGTACATTGCATCGAAGTATGAAGAAATCAGCCCGCCTCGCGTGGAAGACTTCTGCTACATAACTGATAATACGTACAACCAGGCAGAAGTTGTGGAGATGGAAGCTGGTGTACTTAAGTACTTAAATTATGAAAAGGGAAATCCTACTGTAAAGACATTTCTAAGGAGGTTTGCTGGGATTGCTAATGAGAATCAGAAAACTCATAAATTGCAGTTTGAGTTTCTGGGATACTATCTCGGTGACCTAAGTTTGTTGGATTACAATTGTGTAAAATTCTTGCCGTCAATGGTGGCTGCATCAGCTATTTTTCTTGCCAGATTCATCATCTGGCCTAAAGTCCATCCCTGGACTTCAGCTCTGCAAGGATGCTCTGGATACAAGTCCCATGAGTTAAAACAATGCGTGCTTATCTTACACGACTTGTACTTGGCAAGAAAAGCAGGTTCTTTGCAAGCTATACGGGACAAGTACAGGCAGCACAAGCTTGATGCAGGTAGCAAAATGATTGAATTGAGATCTTTATCTGAAACAGTTCAAGAATGTGGCAACCCTGCCATCCCCTCCGGAGATACCAGATACTTATTTCGAGAAATGGTGACAAAATGA 1125 0.4382 MEACAAKRRAEAAAIAQNESSNKKRVVLAELSNLPNAIFPSILNQKCRNKTLSLDHDSNFKDNKSVHVDSKLDADAKLNDSQKTDPHVSQIYQYLHKMEMEPNRRPMPDYLEKVQKNVSANARGILINWLAEVAEEYRLLSDTLHLSVSYIDRFLSANIVSRQRLQLLGVSSMYIASKYEEISPPRVEDFCYITDNTYNQAEVVEMEAGVLKYLNYEKGNPTVKTFLRRFAGIANENQKTHKLQFEFLGYYLGDLSLLDYNCVKFLPSMVAASAIFLARFIIWPKVHPWTSALQGCSGYKSHELKQCVLILHDLYLARKAGSLQAIRDKYRQHKLDAGSKMIELRSLSETVQECGNPAIPSGDTRYLFREMVTK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1238 374 Gene3D - 91 337 - -
Lele27g1238 374 CDD CYCLIN 123 207 IPR013763 -
Lele27g1238 374 Gene3D - 106 219 - -
Lele27g1238 374 SMART cyclin_7 128 212 IPR013763 -
Lele27g1238 374 SMART cyclin_7 225 313 IPR013763 -
Lele27g1238 374 PIRSF Cyclin_A_B_D_E 2 354 IPR039361 -
Lele27g1238 374 SUPERFAMILY Cyclin-like 82 217 IPR036915 -
Lele27g1238 374 FunFam Cyclin superfamily protein, putative 218 290 - -
Lele27g1238 374 SUPERFAMILY Cyclin-like 221 340 IPR036915 -
Lele27g1238 374 FunFam G2/mitotic-specific cyclin 106 217 - -
Lele27g1238 374 Pfam Cyclin, N-terminal domain 91 217 IPR006671 -
Lele27g1238 374 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
Lele27g1238 374 Pfam Cyclin, C-terminal domain 221 341 IPR004367 -
Lele27g1238 374 PANTHER CYCLINS 66 332 IPR039361 -
Lele27g1238 374 CDD CYCLIN 221 312 IPR013763 -
Lele27g1238 374 SMART Cyclin_C_2 221 344 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1238 Lele-ChrLele27 19291999 19293815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1238 1 341 Core Cell Cycle Gene Families AT5G43080 52.493 4.04e-124 360