Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1221 ATGGCTGTGGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCCGGACGGAAGTAGACAACGCAATCGCGCTTCAGGAAGCTACGGCTGCGGGCATTCACAGCGTCGAGAAGCTCATGACCATAATTTCTCAGCACCGAGAGGAGGAGGCTTCTAGCTCCCGAGGTGGGCCTTCGGAACTGGAAGCTCTGGCAGATACGGCAATGAACAAGTTCAAAAGGGTCATTTCTCTCTTGGATAGGCCAAGAATCGGCCACGCTCGTTTCAGAAAAGCTCCCACGACGCAGGCTTCGATTCCTCTTCTCCAGCCGCAGCAGACGCCGGATTCCGAAACCCCAGTGGCTCCCGTTACAGAACGCCAACAGAACAAAACAGAACAACCCTCTGCTTTTAAGGTGTATTGCCCTACGCCGGTTTTACGTCTCCCGCCTCTGCCTCACCAGGCGAACCAACCTTCCCCTTTTCATCGGGTGGAGAAGAAGGAGGCGAACGGCAGTGTCCAATTTTCGGCGTCGCCAACAGTTTCCGCCGCCACTTCGTATATGTCTGCGTTAACAGGGGATACTGATAGTATGCAACGCTCTTGCCATTCTTCGGGGTTCCAAATCATTCACAGTCAGAGATCACAGCAGGGATCCTTCATGGGCAAGCCGCCTCTTTGTTCGAGTTATTTAAAGAGGAAGTGCAATTCAATGGACGATGCCGGTCTCAAGTGTGGATCATCCTCTGGTCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGATAAGGAGAGTGATCAGAGTCCCAGCAATCAGCTCGAAGATGGCTGATATTCCGGCTGATGAATATTCGTGGAGAAAATATGGACAAAAGCCCATCAAGGGTTCTCCTCATCCAAGGGGTTATTACAAGTGTAGCAGCGTTAGAGGCTGCCCGGCTCGCAAACACGTGGAGCGTGCTCTGGATGATCCCGCCATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCACTCGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCCTAG 1038 0.5222 MAVELISGYGDDSFAGRTEVDNAIALQEATAAGIHSVEKLMTIISQHREEEASSSRGGPSELEALADTAMNKFKRVISLLDRPRIGHARFRKAPTTQASIPLLQPQQTPDSETPVAPVTERQQNKTEQPSAFKVYCPTPVLRLPPLPHQANQPSPFHRVEKKEANGSVQFSASPTVSAATSYMSALTGDTDSMQRSCHSSGFQIIHSQRSQQGSFMGKPPLCSSYLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKIRRVIRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLIVTYEADHNHSLEVAAAVVLESS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1221 345 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g1221 345 Gene3D WRKY domain 260 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g1221 345 FunFam WRKY transcription factor 65 258 335 - -
Lele27g1221 345 MobiDBLite consensus disorder prediction 97 128 - -
Lele27g1221 345 MobiDBLite consensus disorder prediction 91 128 - -
Lele27g1221 345 Pfam Plant zinc cluster domain 227 272 IPR018872 -
Lele27g1221 345 SUPERFAMILY WRKY DNA-binding domain 272 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g1221 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 335 IPR044810 GO:0003700
Lele27g1221 345 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g1221 345 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1221 Lele-ChrLele27 19186006 19187297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1221 25 295 WRKY Transcription Factor Family AT4G24240 47.315 3.34e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele27g1221 WRKY 3.1e-25 CL0274