Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1218 ATGGAAGCAGGGGAAGATTGTTGTGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGATTGCGTCGCCGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCCCATTCCTTTACTTTTGACCATGTTTACGGCAGTACGGGTTCTCCTTCATCAGATATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTATTCCAAGGATATAATGCTACCGTTCTTGCATATGGTCAGACAGGTTCGGGGAAAACATACACAATGGGCACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGCTGGATCCCTCTTCCATGAGCAAACAAGAAGCTGCCAATGGACATGCAGGAAAAGTGATGGTCCCCGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACGCTAGCTGGATCTACTGAAGTAAGTGTTTCAACTCTGAAAGAAATGGCTGCTTGGCTGGAACGAGGGTCATTGAGTAGAGCTACTGGGAGCACAAATATGAACAATCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGAGTAAACTCAATGGTGCTATTCCTGGTGAGAACAGTTTAAATGGGTCCATGAATGACGAGTATCTTTGTGCTAAATTGCACCTTGTAGATCTTGCTGGCTCGGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCTCTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGCAACAGCAGAACTGTTATGATAGCCTGCGTAAGTCCTGCTGATATTAATGCGGAGGAAAGCCTCAACACTTTGAAGTATGCAAATCGTGCACGCAATATTCAAAATAAACCTGTTATAAACAGAGATCCCATTTCCAATGAGATGCTGAAAATGAGACAACAACTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTTCTGGGGGCTCTTCAGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCAAATGAGGATCTTTGTCGCGAACTTCACGAATACCGTAGTAAATGTTCTGTTGTAGAACAATTTGAAAAGGATGCCCATGATGGCAACACATGCATTGTTAAGACTGATGGGCTTAAGAGGAGCTTTCCTATCATAGCATCTGATTATTCAATGAATGAAACAACAGGTGATTCAAGAGAAATTGAAGAAGTGGCGAAAGAATGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAGTTGAATAAACGCCTGGAGCAGAAAGAGTCTGAAATGAAGCTTTTTGGAATGTCTGATGCTGAAGCACTCAAGCATCACTTTGGAAGGAAACTAATGGAGTTGGAGGATGAGAAGAGAGCTGTCCAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTTTCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCCCAAAAATTGAAATCACTTGAATCACAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTCCAGCTTCTGAAGCAGAAGCAAAAAAGTGATGAAGCGGCAAAGAGACTGCAAGATGAAATACAATCTATAAAAGCCCAGAAGGTTCAATTGCAACAAAGGATTAAACAAGAGGCAGAACAATTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTCCTGCAATTACGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAACTACAAGCTTTAAATCAGCGCCAGAAATTGGTCCTTCAAAGAAAGACTGAAGAAGCAGCCATGGCCACCAAGAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGTGATACTTCAGCTACCATCAATGGAAGTGCAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCTCTTGCTGAGGAGTTAGCCATACTGAAGCAAGTGAATGAATGTGCTGCAAAGGGCCTCACTCCTCCAAGAGGAAAGAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCTCTTGAGAACATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCTGAGGCGGAAGAAAGAGAACGAGCCTTCACTAATCGTGGACGCTGGAACCAATTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCTGTTGCAGATGCTAGATGCCAGCTGTGGGGGAGAGATATAGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGCCTATTACGGCAAAGTGAGATGAAGCGAAAGGAAGTTGAGAAGGAGCTGAAATTGAGAGATCAAGCTTTTGCGACCACATTGGCTACACCAGCTTCTGGAAACTCGCCAAATTCATTGAAACACTACGGCGAAGATATGAATGGATCATTATCTCCTGCATCTGTGCCAGTACCAAAACAGCTCAAGTATACCCCTGGAGTTGTTAACGGCATAGCGGGGGAATCTGTGGCATTTATAGATCAGAGTAGAAAGATGGTACCCATGAGGCAAGTATCAATGAAAAAACTTGCAATTGTAGGACAAGCTTCGGGGAAGTTATGGAGGTGGAAAAGAAGTCATCACCAGTGGTTGGTACAATTCAAGTGGAAGTGGCAAAAGCCCTGGAGGCTTTCAGAATGGATTCGCCACAGTGATGAGACAGTTACTAGAGCAAGGCCACGGCCACAGGCTTTGCCACTGATCATAGACACAGGACTTTGGAAAGAGCACAACATTAGTGTAACATACTAA 3135 0.4335 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVAVVPGKPQVQIGAHSFTFDHVYGSTGSPSSDMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHAGKVMVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAAWLERGSLSRATGSTNMNNQSSRSHAIFTITLEQMSKLNGAIPGENSLNGSMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACVSPADINAEESLNTLKYANRARNIQNKPVINRDPISNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSKCSVVEQFEKDAHDGNTCIVKTDGLKRSFPIIASDYSMNETTGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGMSDAEALKHHFGRKLMELEDEKRAVQRERDHLLAEVENLSANSDGQTQKLEDVHAQKLKSLESQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKSSSRDTSATINGSATNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNECAAKGLTPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWGRDIEIREMKDQIKELVGLLRQSEMKRKEVEKELKLRDQAFATTLATPASGNSPNSLKHYGEDMNGSLSPASVPVPKQLKYTPGVVNGIAGESVAFIDQSRKMVPMRQVSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETVTRARPRPQALPLIIDTGLWKEHNISVTY 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1218 1044 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1019 - -
Lele27g1218 1044 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 Pfam Kinesin motor domain 37 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele27g1218 1044 CDD KISc_KIF4 7 366 - -
Lele27g1218 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Lele27g1218 1044 Coils Coil 492 512 - -
Lele27g1218 1044 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele27g1218 1044 MobiDBLite consensus disorder prediction 697 718 - -
Lele27g1218 1044 MobiDBLite consensus disorder prediction 691 718 - -
Lele27g1218 1044 Coils Coil 405 432 - -
Lele27g1218 1044 Gene3D Kinesin motor domain 2 393 IPR036961 -
Lele27g1218 1044 Coils Coil 863 890 - -
Lele27g1218 1044 Coils Coil 592 640 - -
Lele27g1218 1044 Coils Coil 673 693 - -
Lele27g1218 1044 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Lele27g1218 1044 Coils Coil 525 559 - -
Lele27g1218 1044 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1218 Lele-ChrLele27 19163226 19173854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1218 49 389 Calmodulin-binding Proteins AT5G65930 35.777 1.59e-53 202