Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1211 ATGGGAAGCATGAAGGTGCATCACTTGGCACGTGCACTCTGGGAGCACGAACCCTCTCCCTCCCTCTCCCTCGGCTGCAAAAGCCTTCGCCCTCTCGTCCCCAAGCTCCCCTCCTCCCCCACCTCTCCCAGTACTCCTCTCACCCCCTTCGACCTCAAAACCTTCATCCACCCTGAAAGTGGCCCCCGAAAACCATCCGACGACTCTCACAAAGATTCACCACCCCAGGGGGAAACGCATCCGGGAGGGACGAGATGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCTGTACCGAGGAGGGATGCGAACGCCGAATGCTCAGCAGATAGAGCAGATCACGGCTCAGCTTGGCAAGTATGGCAAGATTGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGGCAAAAGCAGAAACGCAACAGTCTCGGTCTCTCTCATCACAGTCCCAGATCTACTACTACTACTATGACTTTTGACGCAAGGCTGGGTGAAGTAGTAGGGACGACTGAGGAGCATAGTCCGTACAAGAAGAAGTGCAGGAACTGGGCATTTGAGAGCTTCCAAGATCAAAGCAGGCCGTCATCGTGTAAAGAGGAACAACAACACACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 672 0.5402 MGSMKVHHLARALWEHEPSPSLSLGCKSLRPLVPKLPSSPTSPSTPLTPFDLKTFIHPESGPRKPSDDSHKDSPPQGETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHHSPRSTTTTMTFDARLGEVVGTTEEHSPYKKKCRNWAFESFQDQSRPSSCKEEQQHTTLELFPLHPEGR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1211 223 MobiDBLite consensus disorder prediction 57 75 - -
Lele27g1211 223 Gene3D - 83 150 - -
Lele27g1211 223 SMART HOX_1 81 148 IPR001356 GO:0003677
Lele27g1211 223 MobiDBLite consensus disorder prediction 197 223 - -
Lele27g1211 223 CDD homeodomain 84 145 IPR001356 GO:0003677
Lele27g1211 223 Pfam Homeodomain 84 143 IPR001356 GO:0003677
Lele27g1211 223 FunFam WUSCHEL-related homeobox 4 83 150 - -
Lele27g1211 223 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Lele27g1211 223 MobiDBLite consensus disorder prediction 142 161 - -
Lele27g1211 223 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 223 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele27g1211 223 MobiDBLite consensus disorder prediction 17 90 - -
Lele27g1211 223 SUPERFAMILY Homeodomain-like 80 149 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1211 Lele-ChrLele27 19115051 19115948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1211 4 167 Wox Gene Family AT1G46480 64.571 2.40e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele27g1211 Homeodomain 4.9e-19 CL0123