Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1209 ATGAGTTCACAGCCTGCCGTCCGACGTATCTCTGAATGCTTCATCAAACCACCCCTTCCACTCAATGACTCTAACTCCATCTGCTATCTATCTCCCTGGGATCTTCTCATGTTGTCTTCGCACTACATCCAGAAAGGTCTCCTCTTCTTCAAGCCCTCTCCTCCGAATTCTCCCCTTTTAATGGATTCTCTTCTCCGACGCCTCAAGCATTCTCTTTCTCTCACCCTCCTCCATTTTTATCCCCTTACCGGCCGCCTAGTTACCACACCTCTTCCCTCCTACTCCGTCTTCGTCGATTGCCACAACAGTGAGGGAGCTAGATTCATCCACGCCACATTAGCCATGACCGTCTCCGACATCCTCTCCCCCATCGACGTCCCCTCCGTTGTCCAGTCATTCTTTGACCATGACAGGGCCGTCAACCACGACGGCCACACCTTACCTTTGTTGTCCGTTCAAGTCACCGAATTGATGGACGGCGTTTTCATCGGCTGTTCCATGAACCATTGCATCGCCGACGGCACTTCCTACTGGAGATTCTTCAACGCGTGGTCCGAAATCTTTCGAGCCCAAGAAGGTGACAAGTATGACAGTGACGATGTTTGTATTCCCATCTCACACCCACCCATTCACAATCGTTGGTTCCCAGAGGGTTGCGGTCCCCTAATCGATCTTCCCTTCAAACATCACGATGAGTTCATAAGCAGATTGGTAGCACCCCCTCTGAGAGAGAGGATATTCCATTTCAAAGGAGAGTCTATTGCGAAATTGAAAGCAAAGGCCAACCAAGAGTCCAACACCACCAAGATATCGTCCTTCCAATCATTATCGGCGCTCGTGTGGAGGTGCATAACACGCGCACGGAGTCTCCCCCATGATCAGAGAACAACCTGCAGGTTGGCGGCAAATAACAGATCAAGAATGGAACCGCCTGTGGCGGAGGAGTACTTCGGGAACTCTATGTACCCGGTGGCTGCGCAAACGACGTCGGGGGAGTTGCTGGAGCACGACCTTGGATGGGCGGCGTGGAAGATAAACGTGGCTGTCGCGAATAACGACGATAAAGCAGTGCGTGAGTTTATGAAGAAGTGGTTGGGGAGCCCGATGGTGCTTCAACCGGGTCGATTATTTGACCCTTACAGCGTGATGATGGGGAGCTCACCCAGATTCGACATGTATGGGAACGAATTTGGAATGGGGAAGGCAGTGGGTGTGCGAAGTGGGTACGCCAACAAGTTTAATGGGAAAGTGACGTCGTATCCAGGTCGTGAAGGAGGGGGAAGCATAGATTTGGAGATGTGCCTGCCACCAGAGTTGATGACGGCGCTGGAATCGGATGACGAGTTCATGACTTCTGCGTCTCGGTAA 1368 0.519 MSSQPAVRRISECFIKPPLPLNDSNSICYLSPWDLLMLSSHYIQKGLLFFKPSPPNSPLLMDSLLRRLKHSLSLTLLHFYPLTGRLVTTPLPSYSVFVDCHNSEGARFIHATLAMTVSDILSPIDVPSVVQSFFDHDRAVNHDGHTLPLLSVQVTELMDGVFIGCSMNHCIADGTSYWRFFNAWSEIFRAQEGDKYDSDDVCIPISHPPIHNRWFPEGCGPLIDLPFKHHDEFISRLVAPPLRERIFHFKGESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARSLPHDQRTTCRLAANNRSRMEPPVAEEYFGNSMYPVAAQTTSGELLEHDLGWAAWKINVAVANNDDKAVREFMKKWLGSPMVLQPGRLFDPYSVMMGSSPRFDMYGNEFGMGKAVGVRSGYANKFNGKVTSYPGREGGGSIDLEMCLPPELMTALESDDEFMTSASR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1209 455 Pfam Transferase family 9 450 - -
Lele27g1209 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 451 - -
Lele27g1209 455 Gene3D - 234 445 IPR023213 -
Lele27g1209 455 Gene3D - 9 220 IPR023213 -
Lele27g1209 455 FunFam Tryptamine hydroxycinnamoyl transferase 229 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1209 Lele-ChrLele27 19098009 19099376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1209 68 444 Monolignol Biosynthesis Gene Families AT5G48930 26.847 1.60e-32 126