LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g1204	ATGACGAGCTACGCGTTTCTGAATGATCCGCTCTCAAAGCATACCTCAATTTTTGGGTTACGACTGTGGGTGGTGCTGGGCATATGCGTCGGAGCAGCCATTGTCATTTTACTGTTTATCATATCACTCTGGTTCGCTGCAAAACGCAATAACGCTTCCAAGCTCAAGTCTTGTCAGAAACCCAACATCAACATACCGAATGTGTCCAAGGAGATTCAGGAAATCTGGGTTGACCATTCTCGTGAACCCGCCAAGCCAAACCTTCTGCCCAACCCCGACCCATTGCCGGAATCACAGTCCGAGGCTCTAGAAAGAGCCCAAACCATTCTTCTTCAGCAGGAGGACGAAAGCCAAGGAACAGGCCCCCGCAAAATTCACATTGAAATTGGAAAGGGCCACCGGATTTCGTACCCTGAGAGGGTTGCAGGTTCATCGCATGAAAGCGGGGAGGTTCGATCCGGTGATCAACCCTCTATTGCTGTGCCGGAAGTTTCTCATTTGGGTTGGGGGCATTGGTACACTCTTCGAGAGCTCGAGGTCTCCACCAATTTTTTCGCCGATGAGAACGTCATAGGTGAAGGTGGCTACGGAATTGTTTACCAAGGAGTGTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAATAATAAGGGTCAAGCTGAGAGGGAATTCAAGATGGAAGTTCAAGCAATTGGACGCGTGCGGCATAAAAATTTGGTGAGGTTGCTTGGATATTGTGTTGAAGGAGCTCACAGGATGCTTGTTTATGAGTATGTGGACAATGGAAATCTAGAACAATGGCTACATAGAGATACCGGCCCTTCTAGCCCCCTGACGTGGGATATTCGAATGAATATAATACTAGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCGAAGGTTGTTCATCGGGATATCAAGTCTAGCAATATATTGCTTGATAAGCGATGGAATCCGAAAGTTTCTGATTTTGGGCTTGCAAAACTCTTGGGATCCGAAAGGAGTTATGTGACGACTCGCGTAATGGGAACATTTGGATATGTGGCGCCAGAATATGCAAGCACTGGCATGTTAAACGAAAGAAGCGACGTTTATAGCTTTGGGGTTCTTCTTATGGAGATAATTTCTGGTAGAAACCCAGTTGATTATAGCCGTCCTCAAGGAGAGGTGAACCTGGCTGAGTGGCTGAAGACAATGGTTACAAACCGAAATGCAGAAGGTGTGCTGGATCCTAGGCTTCCTGAGAAACCTTCTTCTAGAGCACTGAAGCGTGCCTTATTAGTAGCTTTACGCTGTGTAGATCCAAATGTCCAGAAAAGGCCAAAAATGGGACATGTTATACATATGCTCGAAGCGGATGAGTTCCCATTTCGAGATGTGAGTTTCCGGACCGTAGAGCTGGAAGGGAATATGGACGGTCCCATCAGGATAACACGAGATAGGATGGTGGAAAAGCGAGTGAAGGAGAAGGTTAATGCCTTGTGTCTTGAATCTGAGTGA	1518	0.4657	MTSYAFLNDPLSKHTSIFGLRLWVVLGICVGAAIVILLFIISLWFAAKRNNASKLKSCQKPNINIPNVSKEIQEIWVDHSREPAKPNLLPNPDPLPESQSEALERAQTILLQQEDESQGTGPRKIHIEIGKGHRISYPERVAGSSHESGEVRSGDQPSIAVPEVSHLGWGHWYTLRELEVSTNFFADENVIGEGGYGIVYQGVLQDNTNVAVKNLLNNKGQAEREFKMEVQAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHRDTGPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPQGEVNLAEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDVSFRTVELEGNMDGPIRITRDRMVEKRVKEKVNALCLESE	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g1204	505	Pfam	Protein kinase domain	186	454	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele27g1204	505	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	307	319	IPR008271	GO:0004672\|GO:0006468
	Lele27g1204	505	FunFam	Probable serine/threonine-protein kinase At1g01540	165	260	-	-
	Lele27g1204	505	SMART	serkin_6	185	463	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele27g1204	505	ProSiteProfiles	Protein kinase domain profile.	185	443	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele27g1204	505	PANTHER	OS01G0323000 PROTEIN	1	469	-	-
	Lele27g1204	505	Gene3D	Transferase(Phosphotransferase) domain 1	261	466	-	-
	Lele27g1204	505	FunFam	Putative receptor-like serine/threonine-protein kinase	261	470	-	-
	Lele27g1204	505	ProSitePatterns	Protein kinases ATP-binding region signature.	191	213	IPR017441	GO:0005524
	Lele27g1204	505	Gene3D	Phosphorylase Kinase; domain 1	160	260	-	-
	Lele27g1204	505	SUPERFAMILY	Protein kinase-like (PK-like)	166	457	IPR011009	-
	Lele27g1204	505	CDD	STKc_IRAK	191	457	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g1204	Lele-ChrLele27	19070073	19073564	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele27g1204	172	460	Trihelix Transcription Factor Family	AT5G38560	46.622	2.80e-86	278

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele27g1204		Pkinase	4.6e-48	CL0016