Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1194 ATGGACACCGCCGATTCCGAATGCTATGGCCCTTCCATCGAAGCTCTTGGTTCTCTCTTCAAGCTCACACAAGTCTTCCTATGGGACGATGGCGCGCAGGATAATACAAGTGATTCTTTATCATGTATATCAATGCTGGGGGAAAGCAAATCATGTCATTATGATGGTTCAGTGGGTGTAGATAACTCTCAATGTGTCTCTGGTGAAGGTGACAATGCAGCAATTTATACTGGTGTATTGTCTGATGTTATCAGGGAGCAAAATGATGGTTACAAAAATGAGGATGTGACTGATGGCGCTCAGGATGGTGACTTATTAGTTAGAAATACCTTTTTAAGTGATGATTTGAAAGCTGCATCAAGTTCACCTGTTGGATCTTCTGGAGGTGAAGGCGGTTTGACAGTTTCTGGTGTCAACCTTTGCGGAATAAAAGATGGTGAACAGTTGATTGATCAAAAAGGCTCGGAAGTTTCATCAATTGTTTGCAAAGATATAGGACATGAGACCTTTTGCAATAGTGACGGTGTTATTTCTCAGCCAATGACTCATGAATCAGATTCATTTCCTATGAGTTCAGAAGGGACTGGATGTGACAAGATTGCTGACTCAAGTGACTCTGGTGAACTTGGAGAATGGATGGTATATTGGGATACTTTCTATGAGAGAAACTACTTTTATAACATCAGAACACAAGTATCAACATGGCACCCATCCCCAGGGATGGAATATCTAGGAATTGGTGGTTGTACAGAAATAGGTAATGGTGACACTGTAGAAGCAACAGAGGAGCATGTTTCTCAGAACAAGACTAACCCCCATGAGGAAACTTTGATTGTAGAGAAATTAGCTAAACATGATTTGTGTTCAACTGACATTGAATTTAGTTCTGACAATATGATCTCTGATATAAGGGTACATAGTGAAGGCCAATCCTTTGAATTGATTGAGAGCAGTAGCTGTCATGATGGAGTTTCATTCTGCTCAATGTCAGATGCCCTGGATTATAACATCAGATATAGTTTATTTTCTGGATTTGATCGTGGTATAAAAATGGACGAGGAAGGATGGTTTTCTGTCACTCCAGAGCCTATTGCTCAGCATCATGTATTACGTTGTGCTTGTGGTGTCATAGTTGATTGTTTTACAGGTGTTGGTGGAAATGCCATCCAATTTACTCAAAGGTGCAGACATGTTATAGCAATTGATATCGATCCAAGGAAGATTGATTATGCAACACATAATGCTGCTATCTATGGAGTGGGTGATCAAATTGACTTCATTATAGGAGACTTTTTCCTTTTGGCACCGAAGTTAAAGGCTGATACTGTTTTCTTATCTCCTCCTTGGGGGGGAACTGATTATGCTACAGTCATGACTTATGACATGAAGACGATGCTTAAACCACATGATGGATATGTTCTCTTCAGAGCTGCAGAGGAAATTGCATCTAGAGTTGTGAAGAAAGTCTTTTTGAATGGTAAATTGAAGGCAGTTTCTGCTTACTTCGGCGACACAACAGATGGAGGGTGCTGA 1533 0.4051 MDTADSECYGPSIEALGSLFKLTQVFLWDDGAQDNTSDSLSCISMLGESKSCHYDGSVGVDNSQCVSGEGDNAAIYTGVLSDVIREQNDGYKNEDVTDGAQDGDLLVRNTFLSDDLKAASSSPVGSSGGEGGLTVSGVNLCGIKDGEQLIDQKGSEVSSIVCKDIGHETFCNSDGVISQPMTHESDSFPMSSEGTGCDKIADSSDSGELGEWMVYWDTFYERNYFYNIRTQVSTWHPSPGMEYLGIGGCTEIGNGDTVEATEEHVSQNKTNPHEETLIVEKLAKHDLCSTDIEFSSDNMISDIRVHSEGQSFELIESSSCHDGVSFCSMSDALDYNIRYSLFSGFDRGIKMDEEGWFSVTPEPIAQHHVLRCACGVIVDCFTGVGGNAIQFTQRCRHVIAIDIDPRKIDYATHNAAIYGVGDQIDFIIGDFFLLAPKLKADTVFLSPPWGGTDYATVMTYDMKTMLKPHDGYVLFRAAEEIASRVVKKVFLNGKLKAVSAYFGDTTDGGC 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1194 510 Pfam RNA cap guanine-N2 methyltransferase 375 491 IPR019012 GO:0001510|GO:0008168|GO:0009452
Lele27g1194 510 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 345 463 IPR029063 -
Lele27g1194 510 Gene3D Vaccinia Virus protein VP39 334 508 IPR029063 -
Lele27g1194 510 CDD AdoMet_MTases 377 448 - -
Lele27g1194 510 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 335 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1194 Lele-ChrLele27 19005723 19010961 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0887 25 5677317 5681464 Lele27g1194 27 19005723 19010961 hybridization
Lele26g0895 26 5741552 5746898 Lele27g1194 27 19005723 19010961 hybridization