Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1190 ATGAACTTCGGAAACGACCATGGAGGAGGAAACGCCGGCGGCGGAAGGCCACCGGCAAATTATCTGCTGGCACGACAACCGTCAGTCTACTCCTTGACATTCGACGAGTTTGTGAATACTATGGGAGGTTCGGGAAAGGACTTTGGGTCAATGAACATGGATGAGTTGCTCAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCTTGAGTGGTGTTCAACAGGGTGGAAGTGCCTCTGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGACGAGGTTTGGAAGGATATTTCCAAGGACTATGGTGCGGCGGGGAAGGATGCTCCAAACGTGCCACGGAGGCAGCAGACTTTGGGAGAGATGACGTTGGAAGAGTTCTTGGTGAGAGCCGGGGTTGTCAGAGAAGACGCACAAGCACAATTGATAGGAAAGCCAAATGGTGGGGATTTCCCCGATTTATCTCGTACTGGAAATAATAATGTTATAGGATTGAGTTTTCAGCAGATGAATATGGGTACAGGCTTAATGGCAAACCAAATTACTGGGAATAATGACCAACTATCTCTTCAGTCTCGCACCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGCTGCCGAACTCTAAGTCACCACAGCCCCAGATATTCCCTAAGCAACCTGCCATGCCTTATGCGGGTCAGATACCATTAACGAACAATACCCAGCTAGGTAATCAGGGAATGAGAGGTGGAATGGCGGGTATTGTGGATCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCTGCACTGCAAAGTGGAGGGATGGGTATGGTTGGTTTAGGACCTGGGGCTGTTCGCGTAGCTACAGGATCACCAGCTAATCAGCTGTCTTGCGATGAAATGGGAAAGAGTAATGATGACACTTCGTCAGTGTCGCCACTTCCTTATGCGTTCAATGGTGGTTTAAGAGGGAGGAAAAGCAGTGGGGCTGTGGAAAAGGTTATTGAGAGGAGGCAGAGGAGAATGATCAAGAATAGAGAGTCTGCTGCTAGGTCCCGGGCTCGCAAGCAGGCCTATACCATGGAATTGGAGGAAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAGTAAAGGAGATGACGAATATGCAACAAGGAGTTAAGAAAAGGTGCTTAAGACGAACCCAAACCGGACCATGGTAG 1278 0.482 MNFGNDHGGGNAGGGRPPANYLLARQPSVYSLTFDEFVNTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGVQQGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGAAGKDAPNVPRRQQTLGEMTLEEFLVRAGVVREDAQAQLIGKPNGGDFPDLSRTGNNNVIGLSFQQMNMGTGLMANQITGNNDQLSLQSRTNLPLNVNGARSNQQQLPNSKSPQPQIFPKQPAMPYAGQIPLTNNTQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMVGLGPGAVRVATGSPANQLSCDEMGKSNDDTSSVSPLPYAFNGGLRGRKSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEEEVAKLKEENEELRRKQAEIMEMQENQVKEMTNMQQGVKKRCLRRTQTGPW 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1190 425 MobiDBLite consensus disorder prediction 404 425 - -
Lele27g1190 425 CDD bZIP_plant_BZIP46 347 398 - -
Lele27g1190 425 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 345 402 - -
Lele27g1190 425 Pfam bZIP transcription factor 347 400 IPR004827 GO:0003700|GO:0006355
Lele27g1190 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 350 365 IPR004827 GO:0003700|GO:0006355
Lele27g1190 425 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 425 IPR043452 GO:0003700|GO:0045893
Lele27g1190 425 SMART brlzneu 343 407 IPR004827 GO:0003700|GO:0006355
Lele27g1190 425 Coils Coil 363 400 - -
Lele27g1190 425 MobiDBLite consensus disorder prediction 1 20 - -
Lele27g1190 425 SUPERFAMILY Leucine zipper domain 347 396 IPR046347 GO:0003700|GO:0006355
Lele27g1190 425 Gene3D - 345 402 - -
Lele27g1190 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 345 396 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1190 Lele-ChrLele27 18995568 18998602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1190 23 425 bZIP Transcription Factor Family AT3G19290 45.977 2.94e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele27g1190 bZIP_1 2.9e-13 CL0018