Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1181 ATGTCATTGGCAGATCTACCTAAAGAAAATAATGAAGCAATAAACTTGATTGATGGAAAGGGGGAATCTGGGACTCATTTGCAAGTGACTGAATCTTCTAAATTAGGAACTCCACAAGATGCTTGTGAAGGTCAGACTGTAGGAAAAGATGGTATTCTTCCTGCGGATGATTCAGCTTCAACCTCAAATGGTGATGGAAAAGAGGAATCTACGATTCATATGCCAGTGCCTGAATTCTCCAAATTAGCGACAGCACCAAATGCTTCTGCCAGTCAAAATGTAGGACAAGATGAACCAGCTTCAACCTCAATCAGTAATGGAAGAGAGGAATCTGGGACTAATTTGCTGGTTACAGAACTCTCAGAATTTACAGCGCCACAAAATGCTTCTGATGCTCAGACTATAGGACAAGATGAAATTCTTCCTGTAGATGGTTCAGCTTCAAAATCAAATGGTATGGTTGGCAAGACCGAAAGAAGCAACGATGGGACTGTGGTTGAAAATTCTAAACCAGAAGCTGTAGAGAATATTTCTGATTTGCAGAAATCCCAAGATGGCTGTTCGACTGTGTCTGTTGACGCTGATGTTGATAATCAGATTATCCACTCAGCTTCTGCTTCTGCTCATGCTGTGCAGCCCAATGCTAATAGAGGCCTTATTGATACAGCAGCCCCTTTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGACGCAAGCTTGTCGAACAAGAACTTGAAAAGGCTTATGAGGAGATCCCTGAGCTCAGAAAACAGTCACAGGCTGCTGAAGGGGCAAAAACACAAGTACTGATGGAGTTGGACAGCGCTAAGAGACTAACAGAAGAGCTAAAACTCAACCTAGAGAGGGCACAAACCGAAGAGCATCAGGCACGACAAGATTCAGAACTTGCAAAACTTAGAGTGGAAGAGATGGAGCAGGGTATTGCAGATGAATCTAGCATTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGCATGCAGCTGCTGTTTCAGACCTACAATCCGTCAAGGAAGAGCTGGATGTGCTGCATAAGGAATATGCTTCTTTAGTGACTGAAAAGGATGTGGCTGTTAAGAAGGCTGAAGAGGCTGTTGCTGAATCTAAGGAGGTAGAGAAGACGGTGGAGGATTTGACTATTGAGCTGATTGCCACAAAGGAGTCATTGGAGTCTGCTCACGCAGCACACTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCCAGGGATCAAGATTCTCTCAATTGGGAAAAAGAACTCAAACAGGCAGAAGAGGAACTCCAGAGACTAAACCAGCAAATTTTGTCTGCAAAGGACCTGAAATCTAAACTGGACACTGCCTCTGCTTTGCTTCTTGATTTGAAAGCTGAATTAGCTTCATATATGGAAACAAAATTAATGCAGGAAGGCAGTGAAGAAGGAATCTCAAAAGGAGACCTAGAGGAACCAGAGAAGAAGAATCACAATGAGATACAAGTAGCAGTAGCATTGGCAAAAAAGGAACTCCAGGAAGTAAAGATAAACATAGAGAAAGCAACTGCTGAGGTTAATTGCTTGAAAGTGGCTGCCGCATCATTAAAAACAGAACTTGAACAAGAGAAATCAGGTCTTGCTAACATTGGGCAAAGAGAGGGGATGGCCTCCGTTGCAGTTGCATCTCTCAAGGCTGAATTGGACACAACTAGATCAGAAATAGCTTTGACCCAGATGAAAGAGAAAGAAGCCAGGGAGAGAATGATTGAGCTTCCCAAAAAACTACAACAAGCAGCTGAAGAAGCTAATCAGGCCAACTTGCTTGCCCAAGCAGCTAGTGAAGAGCTTCGGAAAGTGAAGGAGGAGGCAGAACAAACTAAGGCTGGAGCAACTACCACGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCTAGGGCTTCTGAAAGGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAGCTAGAACCAACAATGAATCAGATTCAATTGCTGGCGTGACTCTTTCTCTAGAAGAGTACTATGAGCTTAGTAGACGGGCCCATGAGGCAGAAGAGCAAGCCGATATGAGGATTGCAGATGCTAATTCTCAAATTGCGATAGCTAGGGAGTCTGAATTGAAAACCCTGGAAAAATTGGATGAAGCTAATAAGGAGATGCTTGCCGGAAGGGAATCTTTGAAGATAGCAATGGGTAAAGCTGAGAAAGCAAAGGAAGGGAAATTAGGTGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAGCAACGAAGAAAGGCTGGTGGATTTGACCAGGGAGTGGCAAACCAGAATAAAAGCCCCAGAGCTAGTATGGAGGGCAATAAGGAAGCAAATAACTTGCACCGAGCTCCCAGTTCAGATAATCCTGATCATTACATGTCAAGCCCAAATGATTATGCACATGCAAACAACGCTGAAAATGGATCATTCCCAGATGCAAGAGTTGGAAGGAAGAAAAAGATATCAATTTTCCCGCGTGTTTTAATGCTCTTCGCCAGGAGGAGATCACCTACGACCAAGTCAGGGTAA 2634 0.437 MSLADLPKENNEAINLIDGKGESGTHLQVTESSKLGTPQDACEGQTVGKDGILPADDSASTSNGDGKEESTIHMPVPEFSKLATAPNASASQNVGQDEPASTSISNGREESGTNLLVTELSEFTAPQNASDAQTIGQDEILPVDGSASKSNGMVGKTERSNDGTVVENSKPEAVENISDLQKSQDGCSTVSVDADVDNQIIHSASASAHAVQPNANRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVEQELEKAYEEIPELRKQSQAAEGAKTQVLMELDSAKRLTEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSIAAKAQLEVAKARHAAAVSDLQSVKEELDVLHKEYASLVTEKDVAVKKAEEAVAESKEVEKTVEDLTIELIATKESLESAHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRLNQQILSAKDLKSKLDTASALLLDLKAELASYMETKLMQEGSEEGISKGDLEEPEKKNHNEIQVAVALAKKELQEVKINIEKATAEVNCLKVAAASLKTELEQEKSGLANIGQREGMASVAVASLKAELDTTRSEIALTQMKEKEARERMIELPKKLQQAAEEANQANLLAQAASEELRKVKEEAEQTKAGATTTESRLLAAQKEIEAARASERLAIAAIKALQESESARTNNESDSIAGVTLSLEEYYELSRRAHEAEEQADMRIADANSQIAIARESELKTLEKLDEANKEMLAGRESLKIAMGKAEKAKEGKLGVEQELRKWRAEHEQRRKAGGFDQGVANQNKSPRASMEGNKEANNLHRAPSSDNPDHYMSSPNDYAHANNAENGSFPDARVGRKKKISIFPRVLMLFARRRSPTTKSG 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1181 877 Coils Coil 384 404 - -
Lele27g1181 877 MobiDBLite consensus disorder prediction 1 168 - -
Lele27g1181 877 MobiDBLite consensus disorder prediction 150 167 - -
Lele27g1181 877 Pfam Weak chloroplast movement under blue light 217 785 IPR008545 -
Lele27g1181 877 MobiDBLite consensus disorder prediction 84 135 - -
Lele27g1181 877 MobiDBLite consensus disorder prediction 779 853 - -
Lele27g1181 877 Coils Coil 519 553 - -
Lele27g1181 877 Coils Coil 253 280 - -
Lele27g1181 877 Coils Coil 610 644 - -
Lele27g1181 877 Coils Coil 437 481 - -
Lele27g1181 877 Coils Coil 288 315 - -
Lele27g1181 877 MobiDBLite consensus disorder prediction 25 40 - -
Lele27g1181 877 MobiDBLite consensus disorder prediction 794 839 - -
Lele27g1181 877 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 218 805 - -
Lele27g1181 877 Coils Coil 761 781 - -
Lele27g1181 877 Coils Coil 342 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1181 Lele-ChrLele27 18935644 18938710 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1181 27 18935644 18938710 Lele01g0861 01 4969567 4972831 CCT
Lele27g1181 27 18935644 18938710 Lele02g0841 02 5113822 5117121 CCT
Lele27g1181 27 18935644 18938710 Lele03g0856 03 4989269 4992533 CCT
Lele27g1181 27 18935644 18938710 Lele04g0858 04 5247846 5251121 CCT
Lele25g0898 25 5745443 5748503 Lele27g1181 27 18935644 18938710 hybridization
Lele26g0905 26 5806522 5810999 Lele27g1181 27 18935644 18938710 hybridization