Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1175 ATGCAAGTGGTGGGGAGGCTAGGCAGCTACATTAGTCGGGGTGTATCCACGGTGTCAGGCTCCGTTCGTCCACTTGGTGGCGCTGTAGATATTGTTTTAGTTGAACAGCAAGATGGGAGCTTCAAGTCTTCGCCTTGGTACGTCCGATTTGGGAAGTCCCATGTCGTTTTAAGGACAGAAGAGAGGATGATCAGCATTAATGTCAATGGAGAGGAAGCAAATTTCCATATGTATATGGATCATAAAGGGCAAGCCTTCTTTCTCAGGGAGGTCGACGCGGAAGAGGGAGAATCTACGTTGTATCCATTATCTTCTGGGGATGAGACAGATATTCTTGATAAGCGGCATATGAAGTCCAGAAGTTTTAGTTTCGAAGATAAAACAAATTATATGGCTCAGGGTGATATGAACACAGGAAGCATGCTGGCCAGAACTACTTCTGATGGATCAATGACAAGTGGGCTTTTCATTGCCGATAATAATTTTCAGCGGGGGTTTTTTAATGCTGACATGAACAATGCACTTCCATTGGAGTGTGCTGAGCTAGCAGCCAACCTGTTGGATGTAAAGTGGTCTACCAATCTTGCTGGTCATAAACCACCTCGAAAAGATCGTGTAAAATTTCAAAAGAGAAAATCTCAGCGTGATAACATGGAGAATTCTTCAGACCAACGTAGATTCTATGATGAAGCTTGTTCCAACCCAGACCTTGAAGTTCCTGGAGGATTTAATGAGGATAACGGTATGTGCTCATCATGTTCAAGCACCACGATTGAAGTTATCTTTTCAGAACAGAAAACTGAAGTGATAACTGAACTACCAAAGAGTTGTGATATTGCAGGGGACCCTGAACATGACAGGAAAATGAAGGAAGTTATAACTGATAGAACCGTCAGTGATTTGGAAGTCGCACGTCTCCAACTTGAAGATAGCATTGAAAAGAAGCAGTTGAGTGGAGAAGATGTTTCTGGTGTAAGAATAATGCCAGGTTGTGGAATTTCAGAGGAAGAGATTCCACCTGATGGAGTTCAGCCACTAGTTCATAGTGGAATGTCAAAGAGTTCAATTGGATGCGTGCATTGTACCACTGAACAAACTCATGAGGTGTTGTACCTTTATAACAAAATAGGTGAAGCACATACTCATGCAGAGATTTTACAAGCGACAACAGTGCTACCTGAGGTTAAAAAAAATGAGGAAGTCACTGAAAATGCTGATGTCATGATGCCCGTAATGATGGTTTCTCAGACTTCTCAGCAAGCAAATTTTGCTCATCGTGGTATTAGCAAGTCTACTGTGGCAAATATTGAAGGCCAAACAGCACTGCCAAAAACTCAAACGATCAATCTGGATATTGGACTTTGTTCAACTGAGAAGGATGGATCAAATTGCGTTGCTGCTACTTCACAGGACTCAGCATGCGATATCTTGAGATTTGGGAAAGATGATGTGAAATGTCTAAAACCAGATGACCAATTATTACCTGAGGAATCAAGTTTCAAGGACAACAATGCCTCATCAGCACACAAGCCTTCCCCCAGTGGGAACTGGAAGCTTTGGCCTTTCTCTTTCAGGAGATCAAGTTCTGAAAAGGTCGTGGTGCCTGCTGTTGATGACAAAGTAACTAATGCTTCAGAGAGTTCAATCAACAAAGATGCAAACGAAAATGAGCTCAAACCCAAGTTAATGAAAAAGAAGGTCAGGGTAAAGACACCAACTGCTGAACAGTTGGCATCCTTGAATCTAAAGGAAGGGAGGAACACTGTAACCTTTACCTTCACCTTCTCCATGGATACGCTGGAGAATGAACAGATTGATGCCCAAATATTTTTATGGAAATGGGACAATCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTAGGAGTAGATTGGTCCCAGACAGGTGTTACACATTTATTCTCAGCTATCAAGGAAAATGGCTACAAACTACTTTTTCTCAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCCTGATTAATCTTAAGCAGAATATCAAAGCACTTTTTCCTCCTGAAAGCAACCCATTTTATGCTGGGTTTGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATCCCAAGAGGGAAAATCTTCATTATTAATCCAAAGGGAGAGATTGTTGTGAACCGCCAACATGACACAAAATCTTATACTTCGCTTCATGCTCTCGTGAATGGGATGTTCCCTCCTTCTACGAATACGAACACATCTGAGCAGTTGGCTGTAATGGTTTTGAGAGACAACTCGAGTGAATCCTTCATGACATTGTCCAGAGTGCAGGACTCTGGTAAATTTCGGAAAATTGCGGAACTGTGTCCTAAAGAACAAAATGAATTGCGACAAGAAACGCAAAAGAGAGAAAATTCAGAACCTAGTGATCCTGATGTTGAAATGCTTGTCAGCAAAGGGGGCAAGATTTCTGAATTCGCTGTCATCAATGAAGCCATTGTGGTTAGCGTCTGCAGATTCAACGTCCCTTTTGCACTTCCAGGCAGCAAAAACCCCACCGCCGCTGAGCCGCACGGCCTCTCTGAGTTCAGAATGGCTGATTCTGCCGTCGCCGTTAGAATCAAATCTCCTAAGCCACCGCTTGAACTCCTCCACACTCATCATTCTCTTCCCGTCGCTCGTCACTACACCTCGACAGCTCCTCCCCTTTATACTTCTTCATGGTATCGTGTCTACAATGAACAGATCCAAGCTGTCTCTAAAATTCTAAAGTTCTGTAAAGAACTTTAG 2817 0.4274 MQVVGRLGSYISRGVSTVSGSVRPLGGAVDIVLVEQQDGSFKSSPWYVRFGKSHVVLRTEERMISINVNGEEANFHMYMDHKGQAFFLREVDAEEGESTLYPLSSGDETDILDKRHMKSRSFSFEDKTNYMAQGDMNTGSMLARTTSDGSMTSGLFIADNNFQRGFFNADMNNALPLECAELAANLLDVKWSTNLAGHKPPRKDRVKFQKRKSQRDNMENSSDQRRFYDEACSNPDLEVPGGFNEDNGMCSSCSSTTIEVIFSEQKTEVITELPKSCDIAGDPEHDRKMKEVITDRTVSDLEVARLQLEDSIEKKQLSGEDVSGVRIMPGCGISEEEIPPDGVQPLVHSGMSKSSIGCVHCTTEQTHEVLYLYNKIGEAHTHAEILQATTVLPEVKKNEEVTENADVMMPVMMVSQTSQQANFAHRGISKSTVANIEGQTALPKTQTINLDIGLCSTEKDGSNCVAATSQDSACDILRFGKDDVKCLKPDDQLLPEESSFKDNNASSAHKPSPSGNWKLWPFSFRRSSSEKVVVPAVDDKVTNASESSINKDANENELKPKLMKKKVRVKTPTAEQLASLNLKEGRNTVTFTFTFSMDTLENEQIDAQIFLWKWDNRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVTHLFSAIKENGYKLLFLSARSISQAYQTRQFLINLKQNIKALFPPESNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEIVVNRQHDTKSYTSLHALVNGMFPPSTNTNTSEQLAVMVLRDNSSESFMTLSRVQDSGKFRKIAELCPKEQNELRQETQKRENSEPSDPDVEMLVSKGGKISEFAVINEAIVVSVCRFNVPFALPGSKNPTAAEPHGLSEFRMADSAVAVRIKSPKPPLELLHTHHSLPVARHYTSTAPPLYTSSWYRVYNEQIQAVSKILKFCKEL 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1175 938 MobiDBLite consensus disorder prediction 802 823 - -
Lele27g1175 938 MobiDBLite consensus disorder prediction 198 227 - -
Lele27g1175 938 Pfam LNS2 (Lipin/Ned1/Smp2) 571 689 IPR013209 -
Lele27g1175 938 SUPERFAMILY HAD-like 611 721 IPR036412 -
Lele27g1175 938 MobiDBLite consensus disorder prediction 210 227 - -
Lele27g1175 938 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Lele27g1175 938 PANTHER LIPIN 497 691 IPR026058 -
Lele27g1175 938 SMART lns2 618 735 IPR031315 -
Lele27g1175 938 MobiDBLite consensus disorder prediction 802 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1175 Lele-ChrLele27 18904952 18911556 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1175 27 18904952 18911556 Lele01g0863 01 4980702 4986524 CCT
Lele27g1175 27 18904952 18911556 Lele02g0845 02 5133019 5139505 CCT
Lele27g1175 27 18904952 18911556 Lele03g0858 03 5001231 5007770 CCT
Lele27g1175 27 18904952 18911556 Lele04g0862 04 5271318 5277665 CCT
Lele01g0873 01 5041698 5044831 Lele27g1175 27 18904952 18911556 CCT
Lele03g0869 03 5063928 5067063 Lele27g1175 27 18904952 18911556 CCT
Lele25g0903 25 5771105 5777581 Lele27g1175 27 18904952 18911556 hybridization
Lele26g0909 26 5842400 5847919 Lele27g1175 27 18904952 18911556 hybridization