Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1172 ATGGTGGTTCCTAAACTATCCTACGAGGAGAGCCGCAGCAAAAGATTGGAGGAGAACAAGAAGCGAATCGAAGCCCTTAATTTGTCCCAGCTTTCTCAAGCCCTCCGAAATTCCCCTTCTCCCAAACCCTCCCCTATGAAGCACACCAAACCTCGCTCAACGGAAAAACAGATTGTTGTCGTAAGGAGGTCTGGCCGTGTCGCAAACAGGCCCGCTCCTGTTTACAAAGAAGTGCTTATTGATCGCGTGGCGATACCTAGAAGAGTTTATGGGACGCGAAGAAATTTATTAAACTGCGTACATGCTTCAGAGGAAGCCAGGGAGGAAGCTTTTGAAAAAGCAGAGAAGCTACTCTCTGATTTAGAATCTGAATATCCGACATTCATAAAGTCAATGCTTCCGTCGCATGTAAGCGGGGGGTTTTGGCTGGGTCTTTCAGTCCAGTTCTGCAAGAGTAACCTTTCAAAGAGGGACGAAATGATTACTTTGATAGATGAAGATGGGGATGAGTATCCCACAGTGTATTTGGCTCGTAAAACTGGACTCAGCGGTGGATGGAAAAGTTTTGCGGTTGCTCATAACCTAGCTGATGGGGACGCATTAGTTTTTCAGTTGATCAGACCTACAGCATTCAAGAGTGAAGAGTACTGCTCGTACAGGGGGAAATTAGCTGTAAATGAATTGCACTTGGAGCTTTTCAAATCAATCTAG 711 0.4571 MVVPKLSYEESRSKRLEENKKRIEALNLSQLSQALRNSPSPKPSPMKHTKPRSTEKQIVVVRRSGRVANRPAPVYKEVLIDRVAIPRRVYGTRRNLLNCVHASEEAREEAFEKAEKLLSDLESEYPTFIKSMLPSHVSGGFWLGLSVQFCKSNLSKRDEMITLIDEDGDEYPTVYLARKTGLSGGWKSFAVAHNLADGDALVFQLIRPTAFKSEEYCSYRGKLAVNELHLELFKSI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1172 236 MobiDBLite consensus disorder prediction 28 43 - -
Lele27g1172 236 Gene3D - 102 216 IPR015300 -
Lele27g1172 236 Coils Coil 104 124 - -
Lele27g1172 236 SMART B3_2 128 214 IPR003340 GO:0003677
Lele27g1172 236 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Lele27g1172 236 MobiDBLite consensus disorder prediction 28 56 - -
Lele27g1172 236 CDD B3_DNA 126 209 IPR003340 GO:0003677
Lele27g1172 236 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 212 IPR044837 -
Lele27g1172 236 Pfam B3 DNA binding domain 128 210 IPR003340 GO:0003677
Lele27g1172 236 SUPERFAMILY DNA-binding pseudobarrel domain 122 212 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1172 Lele-ChrLele27 18888951 18890653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1172 47 212 B3 DNA Binding Superfamily AT5G42700 62.275 1.22e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele27g1172 B3 2.1e-14 CL0405