Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1171 ATGGACATCAACAGTGAGGAGGAAGATGGAGAATTCGAATTCTCAAGAAACTATTTTCTGGCAAAGGAATTGGGCTCCTCGAGCAAGAAATCAACTCACAAGCTTTCCGACATTGACATTGTTGATGAACAGGAATTGAGGGCTGCAGCAGCCAATATTGAGCCCAAGCATGAGAAGGAGATTACCGCATTAATTGATGGTTATAAAAATATGTATTCTGAATGGGTTTTTGCCCTGAGGTGTGATTTTTCCTTGCTAATGTATGGCTTTGGGTCTAAGAAGGCTGTACTTGAAGATTTTGCTTCGACTGCATTGGCTGAACATTCTGTAATTGTTATCAATGGTTATCTTCCAACCATTAACTTAAAACAGGTCGTGATAGCTATAGCTGAAGTGTTATCGGATCAAGTAAAAACTAAACAGAAGGGTTTCAAAAGTGAGCACCCATTCAGTTCTCAATCCATGGAAGACCTTCTTGCATTTTTGGATGGAGCAGAAACAGAGGAGGAAGATTGTTTTGTTTGTGTTGTCATTCACAATATTGATGGGCCTGGATTAAGAGACTCTGAAACCCAACAATATCTTGCTCGACTAGCTGCTTGTTCCCATATTCGTATTATTGCCTCAATTGACCATTTAAATGCTCCTCTTCTCTGGGACAAGAATATGGTTCACAGACAATTTAATTGGTGCTGGTATCACGTCCCCACCTTTGCCCCATACAAGGTTGAAGGCATGTATTATCCTTTGATTCTCGCTCAGGGTGGTTCCAATCAAAGTGTTAAAACAGCTGCAATAGTATTGCAAAGTTTGACACCCAATGCCCAGAGTGTATTTAAAGTTCTTGCAGAACACCAACTCACTCATCCTGATGAGGAAGGCATGCCACACAGTGATCTTTACTCAGTCTGTCGGGAACGCTTCCTTGTAAGCAGTCAGGTTACACTGAACTCCCACTTAACTGAGTTTAAAGACCATGAATTGGTCAAGATTAGGAGGCATTCCGATGGTCAAGATTGCTTATACATTCCTCTGGCAGCTGAAGCACTCCAGAAGGTGTTGCTGGAGATCAATCAATAG 1080 0.4157 MDINSEEEDGEFEFSRNYFLAKELGSSSKKSTHKLSDIDIVDEQELRAAAANIEPKHEKEITALIDGYKNMYSEWVFALRCDFSLLMYGFGSKKAVLEDFASTALAEHSVIVINGYLPTINLKQVVIAIAEVLSDQVKTKQKGFKSEHPFSSQSMEDLLAFLDGAETEEEDCFVCVVIHNIDGPGLRDSETQQYLARLAACSHIRIIASIDHLNAPLLWDKNMVHRQFNWCWYHVPTFAPYKVEGMYYPLILAQGGSNQSVKTAAIVLQSLTPNAQSVFKVLAEHQLTHPDEEGMPHSDLYSVCRERFLVSSQVTLNSHLTEFKDHELVKIRRHSDGQDCLYIPLAAEALQKVLLEINQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1171 359 Pfam Origin recognition complex subunit 2 31 348 IPR007220 GO:0000808|GO:0005634|GO:0006260
Lele27g1171 359 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 11 358 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1171 Lele-ChrLele27 18881278 18883695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1171 12 359 Core DNA Replication Machinery Family AT2G37560 65.805 0.0 505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0907 25 5800063 5803013 Lele27g1171 27 18881278 18883695 hybridization
Lele26g0912 26 5865360 5867715 Lele27g1171 27 18881278 18883695 hybridization