Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1163 ATGGGCAAGAAAATGAACCTTTTGATAACTTTGTCAGCAGCCTTCATCATTGGGGCGATTTTCGTGAGTGTTGGTGCTGAGCCAGTGGAAGATAAAAAGGCGTTGCTTGATTTCTATCGCACCATCGGTCAGTCTCATCCTCTTAACTGGGATGAGAATTCTTCTGCATGCAAAAGCTGGAGAGGAGTTTTCTGCAACAGCGAACAATCCAGAGTCGTAGCCCTCCATTTACCTGGAGCTGGTTTGAGCGGTCCAATCCCATCGAACACTCTTAGCCGTCTCTCAGAACTTCATACTCTTAGTCTTAGATCCAATAGTATAACGGGTCCTTTTCCTTCTAATTTCTCTGAGCTTAAAAACTTGAGTTATGTTTATCTCCAATTCAACAAGTTTTCCGGTCCATTACCATCGGATTTTTCTGTTTGGAATAATCTTAATGCTATCGATTTATCCAATAATTCTTTCAATGGAAGCATCCCTTCTTCCATTAGAAAATTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCGCTTTCAGGGGAAATTCCTGACCTCGATATTCCCAGCCTAAAAGTGCTAAATTTAGCCAACAACCAACTTAGTGGGGTTGTGCCTAAATCCCTCGAGAGATTTCCAGGTTCAGCTTTTGCTGGTAACAACAATCTTACAACAGAAAATTCACTTCCTCCAGCTATTCCACTTCAACCACCAAATGCTCCTCCGAAAAAGGAAACCACACTAAGCGAGCCTGTATTATTGGCTATTATCATCGGTGGCTGTGTGCTATTATTTCTGGTGGTTGCAGCTTTTATGCTTATCCGCAGCTATCAGAAAGCAGATGAAGAAGTGCCACCAGTGAAGTCAAAGAAAAAGGAAAACTCTCTGAAAAAAGAAGTATCTGAAACTGAAAGTCAAGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCCATCTTGCCTTTGACCTGGAAGACCTGTTGAGATCATCTGCTGAGGTACTAGGAAAAGGAACCTTCGGAACAACATACAAGGCTGCTCTAGACGATGTAACCACGGTGGTGGTGAAGAGAATGAAAGAAGTGGTGGTCGGAAAACGCGAGTTTGAACAGCAGATGGAGATGGTGGGGAGGATTAGGCACGATAATGTGGCTCCATTGAGGGCATATTATTATTCCAAGGAAGAGAAACTTATGGTGTATGATCACTTCGAACAGGGTAGCGTTTCTGCAATGTTGCATGGTAGAAAAGGGGAAGACAGGGCTTCTTTAGACTGGGATAGTCGGCTGAGAATTGCAGTAGGTGCAGCGAGAGGGATGGCTCACATCCACACACAACATGGAGGGAAGCTAGTACATGGCAACCTAAAAGCCTCAAACGTCTTCTTAAACTCTCAAGGATATGGTTGTGTATCTGATGCAGGTTTGGCCATATTAACAAGTTCAATACCCTTACCACCACAGAGAACTGGAGGGTACTGGGCCCCGGAAGTAACAGACATCAGAAAGGCGAGCCACGCGGCTGACGTATACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTGACTGGCAAATCACCGATAGCCACAGGGAGCGAGGAGGTGGTGCATCTGGTGAGGTGGGTGAGTTCTGTGGTGAGAGAGGAGTGGACAGCGGAGGTGTTTGATGTTGAGTTACTGAGATATTCAAATATTGAGGAAGAAATGGTAGAGATGTTGCAGATAGGGATGGCATGCGTGGTGAGGGTGCCAGAACGGAGACCAAAAATGCAAGACGTTGTGAGAATGTTGGAGGAAGTTCGTAAAGTGAATACCGGAACCCAATCATCCACAGAACGTTCCACCCCTACCCCACAAGCAATTATTGATGTACCTTCTTCGTCTGTTCCAAAATGA 1890 0.4492 MGKKMNLLITLSAAFIIGAIFVSVGAEPVEDKKALLDFYRTIGQSHPLNWDENSSACKSWRGVFCNSEQSRVVALHLPGAGLSGPIPSNTLSRLSELHTLSLRSNSITGPFPSNFSELKNLSYVYLQFNKFSGPLPSDFSVWNNLNAIDLSNNSFNGSIPSSIRKLTHLTSLVLANNSLSGEIPDLDIPSLKVLNLANNQLSGVVPKSLERFPGSAFAGNNNLTTENSLPPAIPLQPPNAPPKKETTLSEPVLLAIIIGGCVLLFLVVAAFMLIRSYQKADEEVPPVKSKKKENSLKKEVSETESQDKNKIVFFEGRHLAFDLEDLLRSSAEVLGKGTFGTTYKAALDDVTTVVVKRMKEVVVGKREFEQQMEMVGRIRHDNVAPLRAYYYSKEEKLMVYDHFEQGSVSAMLHGRKGEDRASLDWDSRLRIAVGAARGMAHIHTQHGGKLVHGNLKASNVFLNSQGYGCVSDAGLAILTSSIPLPPQRTGGYWAPEVTDIRKASHAADVYSFGVLVLELLTGKSPIATGSEEVVHLVRWVSSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACVVRVPERRPKMQDVVRMLEEVRKVNTGTQSSTERSTPTPQAIIDVPSSSVPK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1163 629 Gene3D Transferase(Phosphotransferase) domain 1 403 618 - -
Lele27g1163 629 FunFam pollen receptor-like kinase 1 297 402 - -
Lele27g1163 629 Pfam Protein tyrosine and serine/threonine kinase 332 595 IPR001245 GO:0004672|GO:0006468
Lele27g1163 629 SUPERFAMILY L domain-like 43 212 - -
Lele27g1163 629 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Lele27g1163 629 MobiDBLite consensus disorder prediction 602 629 - -
Lele27g1163 629 Gene3D Phosphorylase Kinase; domain 1 292 402 - -
Lele27g1163 629 PANTHER OS05G0588300 PROTEIN 14 608 - -
Lele27g1163 629 ProSiteProfiles Protein kinase domain profile. 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1163 629 Gene3D Ribonuclease Inhibitor 29 237 IPR032675 -
Lele27g1163 629 SUPERFAMILY Protein kinase-like (PK-like) 331 596 IPR011009 -
Lele27g1163 629 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 403 610 - -
Lele27g1163 629 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Lele27g1163 629 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Lele27g1163 629 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1163 Lele-ChrLele27 18839534 18841507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1163 20 610 Receptor kinase-like Gene Family AT4G23740 53.355 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g1163 PK_Tyr_Ser-Thr 5.1e-31 CL0016