LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g1158	ATGGGCTTAGCGGTGCTGGAATCTCTCGACACAGCTCGAACACAATGGTACCACATTACGGCCGTTGTCATCGCCGGCATGGGTTTCTTCACTGACGCCTATGATCTCTTTTGCATCTCTACCGTCTCTAAACTCTTAGGTCGCTTGTATTACACCGACCCCACTAACAGCAAACCCGGAGCACTTCCCCACAAAGTCAATAACGCAGTTACAGGAGTCGCCCTCATCGGAACCCTCGTAGGCCAACTATTCTTCGGCTATCTTGGAGACAAGCTCGGTCGCAAGAAAGTTTACGGCATCACTCTCATTCTCATGGTCTTTTGTGCCATATGCTCAGGCCTCTCCATTGGTACATCCCCCAAGGCCGTGATGAACACTCTCTGCTTCTTCAGGTTCTGGCTCGGCTTTGGCATCGGCGGCGACTACCCTCTCTCTGCCACCATCATGTCGGAATACGCCAACAAAAGGACACGTGGTGCTTTCATCGCCGCCGTTTTTGCCATGCAAGGTGTCGGTCTCATATTTGCCGGATTGGTGTCCACGGTGGTTTCGCGACTTTTCATATCCGCCTATCCTGCCCCCTCATATAAAGCAAACCCTGCGCTGTCGACACCACCTGAAGCTGACTTTATGTGGCGAATAGTTCTCATGGTTGGAGCCATCCCTGCGGCGCTGACATTCTACTGGCGAATGAAGATGCCGGAGACGGGTCGTTACACGGCTCTTATAGAGGGAAACGCGAAGCAAGCGGCTGCGGATATGGCCAGAGTTTTGGACATTGAAATCCAAGCCGAGCAAGAAAGGTTGGGTCAGATGAAAGCAGCGAATGAGTATACCTTGTTCTCCGATGAGTTCTTCCGGCGACATGGTCGGCATTTGATAGGCACGATGAGCACGTGGTTCTTGTTGGACATCGCGTTCTACAGCCAGAACTTAACCCAGAAGGATGTTTTCTCATCTACAGGGTTGGTTGACAAGCCGGAGACGATGAGTGCTTTAGAAGAAGTGCGCCAGACGTCGCTCGCCATGTTCGTGATTGCCTTGTTGGGCACATTCCCAGGGTATTGGTTCACAGTGTTCTTCATTGAAAAAATTGGACGCTTCAAGATCCAACTCGTTGGCTTCTTCATGATGTCCTTCTTCATGTTCGTGATCGGTGTTCGATACAAACAAATCAAAACCGACAAGAACCTCTTCGCTTTGCTGTATGGGCTGACCTTCTTCTTCGCCAATTTTGGCCCCAACAGCACCACCTTCGTGCTTCCGGCAGAGTTATTTCCGACGAGAGTGAGGTCGACGTGTCATGCGCTGAGTGCGGCGTCGGGGAAGGCGGGTGCAATATTGGCGGCGTTTGGGGTACAGACGTACACGTTGGATGGGGATGCCGGGAAGATCAAGAAGGCGATGATTCTATTGGCGGTGACCAACCTGGTTGGATTTTGCTGTACATTCTTGGTGACGGAGACCAAAGGAAGGTCGCTGGAGGAAATCTCCGGCGAGAATGGGGATAATGAAACCACCCCAGATCCCCATATTTCAAGGGCTTCGGAGATGATTCCACAGGGAAGTCGCAATCGCACCGAGTCAATGTGA	1593	0.5173	MGLAVLESLDTARTQWYHITAVVIAGMGFFTDAYDLFCISTVSKLLGRLYYTDPTNSKPGALPHKVNNAVTGVALIGTLVGQLFFGYLGDKLGRKKVYGITLILMVFCAICSGLSIGTSPKAVMNTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGLIFAGLVSTVVSRLFISAYPAPSYKANPALSTPPEADFMWRIVLMVGAIPAALTFYWRMKMPETGRYTALIEGNAKQAAADMARVLDIEIQAEQERLGQMKAANEYTLFSDEFFRRHGRHLIGTMSTWFLLDIAFYSQNLTQKDVFSSTGLVDKPETMSALEEVRQTSLAMFVIALLGTFPGYWFTVFFIEKIGRFKIQLVGFFMMSFFMFVIGVRYKQIKTDKNLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAILAAFGVQTYTLDGDAGKIKKAMILLAVTNLVGFCCTFLVTETKGRSLEEISGENGDNETTPDPHISRASEMIPQGSRNRTESM	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g1158	530	TIGRFAM	2A0109: phosphate:H+ symporter	5	500	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Lele27g1158	530	FunFam	Inorganic phosphate transporter 1-6	17	511	-	-
	Lele27g1158	530	Pfam	Sugar (and other) transporter	23	498	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele27g1158	530	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	18	495	-	-
	Lele27g1158	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	21	491	IPR020846	GO:0022857
	Lele27g1158	530	Gene3D	MFS general substrate transporter like domains	17	513	IPR036259	-
	Lele27g1158	530	MobiDBLite	consensus disorder prediction	496	530	-	-
	Lele27g1158	530	CDD	MFS_PhT	22	490	-	-
	Lele27g1158	530	SUPERFAMILY	MFS general substrate transporter	9	498	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g1158	Lele-ChrLele27	18803214	18804806	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele27g1158	3	500	Inorganic Solute Cotransporters	AT5G43360	62.818	0.0	654