Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1148 ATGGTATATGGACCCTGTCACCCGGTCAGCCTCGTGTGCGTGTCGTTCTCCGGTTATGCGGGTTTTCTTGCTTTGGCGCCAATGTTTATGCAGATTCTGCAAGTGTCGGGCTTGTGCGCCGTTCGCTGTTCCACTTTCCGACATTGTTTCAGAGGTGTTGGTTGCCCGCCCGCCCGCCCGCCCCAACTACGACCGCTGTGTGCATCAGGGCCACGGGAAGCTGCCACGTGTAGTGAGATCACCACGTTGCGGATGAATAAGCGATGTAATCAGCGTTGGAAAGAGTTGAAAAGAATCGGTACTGGAGAATTTATAGTGTCAATACTCGATATGAAATACATGTTTCTTCTCATTGTCACTTTCAAGATCATCAAGAAGAAGCTAAGCAAGCTGCAAGAGGCAATGGGATTTCAAACACACCATTCAAGTAAACCCAAAGTGCAACCTGTAACCAAGCCCATTCCCTCGTCCTACGATTCATGGACGGCGAGGCATCCTTCAGCGTTGCGTTCATTTGATAGATTGATGAAAGCAGCAAGTGGAATGGACATGGTTGTGTTTTTAGACTATGATGGCACCTTATCACCCATTGTTAATGACCCTGATCGTGCTTTTATGTCTGACGAGATGCGTGCAGCAGTGTGTGGAGTTGCTAAGAATTTCCCAACTGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGAATTTGTCAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATAGCACCATCAGTGACAGCTAGAACTTCTGATGGCGACCACTATAACATGGCCCTTTACACCACAAAGGACAACGGAGTTCCCTTTCAACCTGCCAAGAAATTTTTGCCTGCAATTCGAGAGATATTGAAAGTATTAGAGAATAAGATAAAAGGCATACAAGGTGCAAGGATAGAGGACAATGGATTCTGCATTTCTGTGCACTTCCGGCAAGTTCAAGAAAAGGACTATGCTGAATTAGAAGTGAAGGTCAAGTCTGTGCTTGAAGAACGTCCAGACTTTTGCTTAACTGAGGGTAAAAAGGTTCTGGAAATAAGGCCATCCATAGAATGGAACAAAGGTCATGCCCTGGAATATTTTCTGGACACACTAGGGTTAAGCAGTTCCAGCAATATCCTTCCAGTGTACATTGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAGAAGAGAGGACAAGGCTATCCAATTTTAGTATCTTCAATTCCAAAGGAAACAAAAGCTCTGTACTCTCTGAGAGACCCGTCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGAAAACCATTATTGGCTCAAACTAA 1356 0.4447 MVYGPCHPVSLVCVSFSGYAGFLALAPMFMQILQVSGLCAVRCSTFRHCFRGVGCPPARPPQLRPLCASGPREAATCSEITTLRMNKRCNQRWKELKRIGTGEFIVSILDMKYMFLLIVTFKIIKKKLSKLQEAMGFQTHHSSKPKVQPVTKPIPSSYDSWTARHPSALRSFDRLMKAASGMDMVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVCGVAKNFPTAIISGRSRDKVKEFVKLNNVYYAGSHGMDIIAPSVTARTSDGDHYNMALYTTKDNGVPFQPAKKFLPAIREILKVLENKIKGIQGARIEDNGFCISVHFRQVQEKDYAELEVKVKSVLEERPDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQKRGQGYPILVSSIPKETKALYSLRDPSEVLIFLSRLAKWRKTIIGSN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1148 451 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 125 446 IPR044651 GO:0004805|GO:0005992
Lele27g1148 451 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 186 404 IPR006379 -
Lele27g1148 451 FunFam Trehalose 6-phosphate phosphatase 290 448 - -
Lele27g1148 451 Pfam Trehalose-phosphatase 187 431 IPR003337 GO:0003824|GO:0005992
Lele27g1148 451 Gene3D - 184 267 IPR023214 -
Lele27g1148 451 Gene3D - 281 448 IPR023214 -
Lele27g1148 451 CDD HAD_TPP 185 433 - -
Lele27g1148 451 SUPERFAMILY HAD-like 185 446 IPR036412 -
Lele27g1148 451 Coils Coil 323 343 - -
Lele27g1148 451 TIGRFAM T6PP: trehalose-phosphatase 185 442 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1148 Lele-ChrLele27 18722461 18728613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1148 186 441 Trehalose Biosynthesis Gene Families AT1G70290 26.471 3.88e-09 57.0