Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1147 ATGATGGATTGCAATAAAGATGAGGCTGTTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCAGGCAGGGAATATGCTGGTGCTAAGAAGTTTGCCCTCAAGGCTCTAAATTTGTATCCTGCACTGGATGGTCTTTCACAGTTTTTGACCAACCTTGATGTTTACATCTCTGCTGAGAATAAAGTTAGTGGTGAAATGGATTGGTATGGTATACTTGGAGTGAACCCCTTCGATGATGAAGAGACAGTTAGAAAACAGTACCGGAAGCTGGCTCTCACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGCTTGTTGTCAGATAAAACCAAGAGACTAGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACTCCCAACCATGCTGGATCTCAATCAGAAGTACCTGGTTCAAATGGTTTTTATAATTTCAACAAGAATTTAACTTCAAATGTGAGGACTGGAAATAGTAATGCCCAGGCACGCCATGCCTCGGCTCCTCGTCCACAGAAGAAGGCTGACACCTTTTGGACTATTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTTTATTTGAATCATAGACTCCTATGTCCCAATTGTAATGAGGCTTTCTCGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAATTGGTCTTCACGCCAGCAGCATCAGAGTTCTCGACATCATGCTTCAAGTAATAATCGATCTAATGCCGGAAAATTTTTTACAGTTTCTCAAAATTCAGATGCTAGTGGTACTTCAGGCATGTCATCATTTGGTAAAACAAGTTTTCAGTGGGGTTCTCACTCTAGCATGGCTGGTTTTGTTGGCATCGATGGGTCATCTGTTGCTGCTCAAGCTGCATGTGTTGTGCAGCAGGCTAGTGAGAAAGTCAGAAGGGAACGTGAGGGAGAACCGTCAATTGCTGCATGGGAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCCTTTCATAAAGGGGAGAAACCTTGGAAGAGGAGGACAGATGATATGGGTACGAATGGTATTAAAGGATACATGGGAAACCATATGACCATGGGACAAGGAGCAGCTGGTATGGGATATGCTTCTGATTCAAGAAAAGCTAACTGGGAAACTGAAAGAAGCTATGGTTTTTCAGGCATGAAGCCTAGCAGTACGAGAGAGTTATCATTGTTTGAAATCCGAAATATGTTGGTGGATAAGGCACAAAGTGAAATTCGCAAGAAACTTGAAGAATGGAAATTGGTAGCTCAATCTAAGATCACAAGCAAGTCCAAAGAGAATAAGAGACAAAAAATCACATTGACCAGTAAAACATCTGATCCAAAGAAGCATAAAGAGTTCATTTCTGATAATAGCTGTCAAGTAGAAGGTGATTCTTTCCCTGTCACATCTGATAATACGGTTAAGGAGGATCAATCCTACATCATAATGAATGTTCCAGACCCTGATTTCCACAATTTTGACTTGGACAGAACTGAAAATGCCTTTGGTGAGGACCAGGTCTGGGCTGCCTATGATGATGACGACGGAATGCCTCGTTATTATGCTCGAATTCACAAGGTGATATCCATGGAGCCATTTATAATGCGAATCAGCTGGCTTAACTCTAGGAGCAACAGTGAATTGGGTCCCATAGATTGGATAGGCGCTGGTTTTACTAAAACTTGTGGGGACTTTAGGCCTGGCAAGCATGAAATAACTGAGACATTGAATTCATTCTCACACAAGGTTAGGTGGACGAAAGGCACCAGAGGAGTCATTCGCATCTTTCCCCTGAAGGGGGAAGTCTGGGCTCTATATAAGGACTGGTCTCCCGATTGGAACGAACAGACTTCAGATGAAGTGATACACAAATATGATATGGCTGAGGTGCTTGAAGATTTTGAGGAAGAGCTCGGGGTATTAATTGCCCCATTGATTAAGCTTCCAGATTTCAGGACCGTGTTTAGAAGGCATGCTGATCCTGATCGGGTGATGAGGATTCCTAAAGAGGAGATGTTTCGTTTTTCTCACCAGGTTCCTAATTACATCCTTACAGGCAAAGAAGCCGATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTTCAAGCCACTGCGGAATCTAATGAGGGATCCGGTGCTGAAAGGCCTGATGAAGACGCTGTGCCCAATTCAACTGAAATGGAGAAAGCTTTAGAAACAAGAGGAGGGGAACAATTGAACGAGATTTTTACATAG 2313 0.428 MMDCNKDEAVRAKEIAEKKFSGREYAGAKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNLTSNVRTGNSNAQARHASAPRPQKKADTFWTICNRCRTHYEYLRVYLNHRLLCPNCNEAFSAIEKEPPPNYFKSTNWSSRQQHQSSRHHASSNNRSNAGKFFTVSQNSDASGTSGMSSFGKTSFQWGSHSSMAGFVGIDGSSVAAQAACVVQQASEKVRREREGEPSIAAWERSQMSKRTDGSFHKGEKPWKRRTDDMGTNGIKGYMGNHMTMGQGAAGMGYASDSRKANWETERSYGFSGMKPSSTRELSLFEIRNMLVDKAQSEIRKKLEEWKLVAQSKITSKSKENKRQKITLTSKTSDPKKHKEFISDNSCQVEGDSFPVTSDNTVKEDQSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVISMEPFIMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRPGKHEITETLNSFSHKVRWTKGTRGVIRIFPLKGEVWALYKDWSPDWNEQTSDEVIHKYDMAEVLEDFEEELGVLIAPLIKLPDFRTVFRRHADPDRVMRIPKEEMFRFSHQVPNYILTGKEADNAPKGCRELDPAATPLDLLQATAESNEGSGAERPDEDAVPNSTEMEKALETRGGEQLNEIFT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1147 770 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele27g1147 770 Pfam DnaJ domain 67 128 IPR001623 -
Lele27g1147 770 Pfam Domain of unknown function (DUF3444) 500 706 IPR024593 -
Lele27g1147 770 SMART dnaj_3 66 123 IPR001623 -
Lele27g1147 770 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lele27g1147 770 MobiDBLite consensus disorder prediction 729 770 - -
Lele27g1147 770 CDD DnaJ 67 120 IPR001623 -
Lele27g1147 770 MobiDBLite consensus disorder prediction 161 183 - -
Lele27g1147 770 MobiDBLite consensus disorder prediction 737 761 - -
Lele27g1147 770 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele27g1147 770 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele27g1147 770 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele27g1147 770 MobiDBLite consensus disorder prediction 316 362 - -
Lele27g1147 770 MobiDBLite consensus disorder prediction 340 361 - -
Lele27g1147 770 PANTHER BNAC03G44070D PROTEIN 2 723 - -
Lele27g1147 770 MobiDBLite consensus disorder prediction 233 278 - -
Lele27g1147 770 Gene3D DnaJ domain 64 178 IPR036869 -
Lele27g1147 770 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Lele27g1147 770 MobiDBLite consensus disorder prediction 161 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1147 Lele-ChrLele27 18715001 18717313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1147 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 8.59e-30 119