Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1145 ATGGTTTACAGCAGTTGTCTAAGGTCTTTGGTTGTTCAACTTGGATCCTTCACCAATAAAGTGCAATTCTACAACATTGTGAGAAGTTTGCAGAAAGTTCCCTCCATTTCTTATTCGTGGAATCGTCGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGCCATGTCAAGCGCGGGACCCACTGTTGATATGTTGCCAGAGAAAGATGATGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTATGCCCCGGCTGGCTGGTTATGGTCTTGTTCCCAATTCTTTACCTCGTTTTATCTTGTCATCAGACCAATCTTATGCGATTGCATTTTTAATTGGCAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTTACCATGGAGGATTTTTATGATATTAAGACATCAAATATTGATGGTCCATCCGTGTGCTTGTTCGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAATCTCATGAAGCATCCAAAATTTTTGACTGATACCAAATTGGCTATAAGTGTGTTATCGTTCTCTTTTTCATTACTGTTATGCACTACTCCTAGTGAAACTTATCAGCAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACCGCAATTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAATTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTATGTTGTGGCAGAACCTGAGATCCAGGTGAACCTTGATTACGTTACTTTATTGATTGCTCTAAATGATCCACAAAACTGTGGTTTTGCATTTCAAAGTTCACATGTCAGGAGACTAGTCAAATACCCTGAATGTGTTGACATTCTATCCATTTCGTTGCCAATTCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGGTTATGGGATGTAGTACCAAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCGAAGCAGCCGCTCGTAGGCTAACTGAAGCCGCATTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGGTTCCATCATGATAAAGCAAACCCAGCTAATTCTGAGGAAGCAGGTCCAGGATCCAGCTAG 1347 0.4276 MVYSSCLRSLVVQLGSFTNKVQFYNIVRSLQKVPSISYSWNRRFKTSIGMMVNTGAMSSAGPTVDMLPEKDDDGGFASGGWKSMPRLAGYGLVPNSLPRFILSSDQSYAIAFLIGSEDGRLSCGYSSFRGKRVTMEDFYDIKTSNIDGPSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISVLSFSFSLLLCTTPSETYQQTDADFLDSERDTFRDDGSTASTAILVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRIDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEIQVNLDYVTLLIALNDPQNCGFAFQSSHVRRLVKYPECVDILSISLPIQEQVIDEELELLVLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKANPANSEEAGPGSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1145 448 SMART PP2C_4 111 428 IPR001932 -
Lele27g1145 448 SUPERFAMILY PP2C-like 114 431 IPR036457 -
Lele27g1145 448 CDD PP2Cc 122 430 IPR001932 -
Lele27g1145 448 PANTHER PROTEIN PHOSPHATASE 105 430 - -
Lele27g1145 448 Gene3D - 349 445 IPR036457 -
Lele27g1145 448 Gene3D - 111 330 IPR036457 -
Lele27g1145 448 Pfam Protein phosphatase 2C 367 423 IPR001932 -
Lele27g1145 448 Pfam Protein phosphatase 2C 124 320 IPR001932 -
Lele27g1145 448 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
Lele27g1145 448 ProSiteProfiles PPM-type phosphatase domain profile. 122 430 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1145 Lele-ChrLele27 18706510 18710405 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1145 1 434 PP2C-type Phosphatase Gene Family AT5G53140 55.605 5.38e-160 457