Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1143 ATGCGAGCCAGTGGGGCCGTCTCTGCCATAGTGCTTTCCGCGAACCTTTGTCTCCTTGCTCTCTCCTTCCTTCTCTCAAGTGTTCGAAGGTGTCAAAAATCCCTCGCTCCGCCTGTGATTCCTCATTCAATTCCCAGCCTGGACAAGCACAATCTATTTCCTGATTGGTATCCTTCATCCCCATCTCATCATCATGATCTTGTTCTACTATTTCTCTCGCCTATTTTAACTGCTGAGATTTTTATTGGGAATCATTCTCCTTCATGGTCCCTTTGCAATTTCTGCGCTTTGTTTCTCATCACCACCGTTATGAATATTCAGCAAGAGAAGTTTGTGAGGTTTCGGGATTGGAATTCAGACAAGGGTTCTGAAAGTCAATATTCTGAAAATACCATAACGCACCCAGGGAGAATAAGAAGTACGCTATATTCTATTTCAGCTAAGTTTCAAAGAGGCTTTGACTCTGGTTCTGAGAGTATAAAGAGATTTAGAAAATCATTCAAATATTTTCCCCCTGACAGTCGTTTGGCCCGGAGCTTTAGTTCTAGAAAGAAAATCCTTGATCCACAAGGCCCATTCCTTCAGAAGTGGAACAAGATATTTGTATTATCATGTATTATTGCTGTGTCACTAGATCCTTTATTCTTTTATGTCCCTGTCATTAATGATGAGAAGAAATGCCTTTCATTGGACAACAAGATGGAGATAACAGCCACTATTTTAAGATCTTGCTCAGATATTTTTTACATAGTCCACATAATTTTCCAATTCCGTACTGGATTTATTGCACCATCTTCTCGAGTATTTGGAAGAGGTGTTTTGATTGAAGATGCTTGGGCAATAGCAAAGAGGTATCTGGCATCATACTTCTTTGTTGACATTCTTGCAGTTCTTCCCCTCCCACAGGTGGTGATTTTAATCTTAATTCCAAAGATGGGAGGCTTTAAATCGTTGAACACGAAGAACTTGCTGAAATTTGTTGTTTTCTTCCAATATGTGCCGAGGGTATTACGAATTATTCCATTATATAAAGAAGTGACAAGGACCTCTGGCATTATCACTGAAACTGCTTGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTTGCGAGTCATGTTGTAGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAGACAACATGCTGGCAAGATGCATGTCTAAGAAATACTACCTGCGACAGGGCATATTTGTATTGTGATAAAAATCAAGGGTTGAGCAATATTGCAACATTCTTGAATGCTTCTTGCCCAATAGTGGAGGATTCAGAGAAATTCAATTTTGGAATATTTCTTGATGCGCTTCAATCTGGTGTTGTGGAGTCAAGAGATTTCCCTCAGAAGTTTTTTTACTGCTTTTGGTGGGGCCTCAGAAATCTAAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTACGTTTGGGAGATTTGCTTTGCAGTTTTCATTTCCATCTTTGGTTTGGTGTTGTTTTCATTTCTCATTGGAAACATGCAGACATACTTGCAATCAACAACTACAAGATTAGAAGAGATGAGAGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATCGACTACTCCCAGATAGTTTAAGAGAGAGAATCAGACGGTATGAACAATACAAATGGCAAGAAACCAGAGGCGTTGATGAAGATAATTTGATCAATAATCTTCCCAAGGATTTGAGGAGGGATATTAAGCGTCATCTTTGCTTGGCTCTGCTGATGAGACCAGTTCGCTACCCTGTTTTCTTCTCTCTGAGTGATCCTCCCCGCATTGATAATTCATCAGACATCAGGCCTCTGATTGAGTTATGA 1842 0.4023 MRASGAVSAIVLSANLCLLALSFLLSSVRRCQKSLAPPVIPHSIPSLDKHNLFPDWYPSSPSHHHDLVLLFLSPILTAEIFIGNHSPSWSLCNFCALFLITTVMNIQQEKFVRFRDWNSDKGSESQYSENTITHPGRIRSTLYSISAKFQRGFDSGSESIKRFRKSFKYFPPDSRLARSFSSRKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYVPVINDEKKCLSLDNKMEITATILRSCSDIFYIVHIIFQFRTGFIAPSSRVFGRGVLIEDAWAIAKRYLASYFFVDILAVLPLPQVVILILIPKMGGFKSLNTKNLLKFVVFFQYVPRVLRIIPLYKEVTRTSGIITETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWQDACLRNTTCDRAYLYCDKNQGLSNIATFLNASCPIVEDSEKFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLATSTYVWEICFAVFISIFGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEDNLINNLPKDLRRDIKRHLCLALLMRPVRYPVFFSLSDPPRIDNSSDIRPLIEL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1143 613 SUPERFAMILY cAMP-binding domain-like 517 584 IPR018490 -
Lele27g1143 613 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 174 585 - -
Lele27g1143 613 Pfam Ion transport protein 197 515 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele27g1143 613 SUPERFAMILY Voltage-gated potassium channels 188 510 - -
Lele27g1143 613 FunFam Cyclic nucleotide-gated ion channel 1 515 579 - -
Lele27g1143 613 Gene3D Helix hairpin bin 514 579 - -
Lele27g1143 613 Gene3D - 198 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1143 Lele-ChrLele27 18689706 18695104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1143 104 585 Ion Channels AT5G53130 74.227 0.0 741