Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1142 ATGTTTGAGAAGATGGATGAACAACTGTTGGACGCAATGTGTGACCGTCTCAAGCCAGTGCTTCACACTGAAGAAAGCTGCATTGTTCGGGAAGGAGACCCTGTCAGTGAGATGCTCTTCATAATGCGAGGCAAGCTATTGACCGTGACTACTAATGGCGGAAGAACAGGCTTCTTCAACTCTGAATACCTCAAGGCTGGCGACTTCTGTGGCGAAGAGCTTCTCACATGGGCTTTGGACCCACATACCTCGTCCAATCTTCCCATCTCAACTAGGACTGTTCAAACCCTTTCAGAAGTTGAAGCCTTTGCTCTGAAAGCCGACGACCTGAAGTTCGTGGCATCGCAGTTTCGACGTCTTCACAGTAAGCAGATTCGCCATACTTTCAGGTTCTACTCTCAACAATGGCGCACATGGGCTGCATGTTTCATACAAGCGGCTTGGCGCCGGTATAGTAAGAAGAAGCTCGAAGAGTCTCTCCGGGATGAGGAGAATAGGCTGCAAAATGTTCTGGCCAAGGCAGGTTGCAGCACTCCAAGTCTTGGTGCCACAATATATGCTTCAAGATTTGCTGCTAATGCACTTCGAGCTTTACGCCGAAATGGCTCTAGGAAGACAGCGAGGGTTCAGGAGAGAATACCACCCATGCTGCTTCAGAAGCCTGCTGAACCTGACTTTACTGCTGAAGTGCAATAG 696 0.4928 MFEKMDEQLLDAMCDRLKPVLHTEESCIVREGDPVSEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHTSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQIRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLRDEENRLQNVLAKAGCSTPSLGATIYASRFAANALRALRRNGSRKTARVQERIPPMLLQKPAEPDFTAEVQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1142 231 Pfam Cyclic nucleotide-binding domain 25 112 IPR000595 -
Lele27g1142 231 Coils Coil 153 173 - -
Lele27g1142 231 SMART cnmp_10 1 132 IPR000595 -
Lele27g1142 231 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 226 - -
Lele27g1142 231 Gene3D Jelly Rolls 1 119 IPR014710 -
Lele27g1142 231 ProSiteProfiles cAMP/cGMP binding motif profile. 1 85 IPR000595 -
Lele27g1142 231 SUPERFAMILY cAMP-binding domain-like 1 119 IPR018490 -
Lele27g1142 231 FunFam Cyclic nucleotide-gated ion channel 1 1 117 - -
Lele27g1142 231 CDD CAP_ED 1 132 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1142 Lele-ChrLele27 18688648 18689343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1142 1 229 Ion Channels AT5G53130 83.478 5.04e-131 384