Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1140 ATGAAGAAGCTAAAACGTCATCCGCCGTCGCCCACGGCGGATATACGGCGATTAGACACTGATCCCATAGCCCTGTGCCCTGACACTCTTATGAATATAAAGAATGCTCGGCTTAGAAGACTAAAAATCCAGCGGTTCAAGTTGAAGTATACTTGTGAAGCGAAAATACATGTCGCCTCCGGTGATCGTGAGGAAGGGACAAAGTGTGCAGAGTCAGAAAGTAAAGATAGAACTATTAATGAATCGATGCAGATATCATTGTCGTTAACGACGTCGTCGTCGAAGGAGGAGGATCGGTCGAGTTTGGCGGGAAACAACGGCGTTCTGGTGGATGCTCTCAGAGGTGAGAAATACAAAGAGGATCGCTGTGATGTGGAGGATTTATATTACGGTTCGGTGTCATTGATAGGTAGAAGGAAAGAGATGGAAGATGCTGTGAGCATAGAGGTTGGGTTTGTGGTGCAGGAGAGAACCAAGTGTGACTTCTTTGCAGTCTATGATGGCCACGGTGGGGCCCAGGTGGCGAAAGCGTGCCGAGAGCGATTATACCAATTGGTGGCGGAGGAGTTGGAGCGGCATGGAAGAAATGGTGGCGAAGTGGATTGGGAGGGAATGATGGAAGGGTGTTTTGATAAAATGGACAGAGAACTGGAAGATAATGCGGCGGTACGAACGGTGGGATCTACAGCGGTAGTGGCCGTGGTGGCAAAGGATGAGGTGGTTGTGGCCAATTGCGGCGACTGTAGGGCGGTGATGGGAAGAGGAGGCGAGGCTCTCGCCTTGTCTGATGATCATAAGCCTGACAGGCCTGATGAGTTGATGAGAATAGAATCCGCTGGTGGAAGGGTCATAAACTGGAACGGCCAACGCGTTCTAGGAGTTCTTGCCACCTCCAGATCTATTGGAGACCAATACCTTCGACCTTACGTAATATCGAAACCAGAAGTGACGGTGACAAAACGAACCAACGAGGATGAGGTTCTTATACTGGCGAGCGATGGCTTGTGGGACGTGATCTCCGGTGAAGCTGCGTATGAGGTGGTGAGGAAGTGTCTAAGTGGCCAAGCCAGGCGGCGGAATTCGCCGGAGCCTGAAAATCAAAGCCCGGCCAGTGAGGCCGCAGCTCTGTTAGCTGAACTAGCAATGGCCAAAGGAAGCAGAGATAACACAAGTGTCATCGTAGTTGACCTCAAGAGCCATAACAATAATATTAACTAA 1218 0.5016 MKKLKRHPPSPTADIRRLDTDPIALCPDTLMNIKNARLRRLKIQRFKLKYTCEAKIHVASGDREEGTKCAESESKDRTINESMQISLSLTTSSSKEEDRSSLAGNNGVLVDALRGEKYKEDRCDVEDLYYGSVSLIGRRKEMEDAVSIEVGFVVQERTKCDFFAVYDGHGGAQVAKACRERLYQLVAEELERHGRNGGEVDWEGMMEGCFDKMDRELEDNAAVRTVGSTAVVAVVAKDEVVVANCGDCRAVMGRGGEALALSDDHKPDRPDELMRIESAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNEDEVLILASDGLWDVISGEAAYEVVRKCLSGQARRRNSPEPENQSPASEAAALLAELAMAKGSRDNTSVIVVDLKSHNNNIN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1140 405 ProSiteProfiles PPM-type phosphatase domain profile. 129 397 IPR001932 -
Lele27g1140 405 PANTHER PROTEIN PHOSPHATASE 90 397 - -
Lele27g1140 405 MobiDBLite consensus disorder prediction 63 102 - -
Lele27g1140 405 Pfam Protein phosphatase 2C 130 390 IPR001932 -
Lele27g1140 405 SUPERFAMILY PP2C-like 127 399 IPR036457 -
Lele27g1140 405 MobiDBLite consensus disorder prediction 79 101 - -
Lele27g1140 405 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169
Lele27g1140 405 FunFam Protein phosphatase 2C 51 123 405 - -
Lele27g1140 405 SMART PP2C_4 119 395 IPR001932 -
Lele27g1140 405 CDD PP2Cc 129 397 IPR001932 -
Lele27g1140 405 MobiDBLite consensus disorder prediction 63 78 - -
Lele27g1140 405 Gene3D - 126 404 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1140 Lele-ChrLele27 18674046 18676457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1140 116 398 PP2C-type Phosphatase Gene Family AT2G29380 49.834 1.27e-90 276