Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1134 ATGAAGTTTAGCTTTCTGAAGTGTGTTTGTATTGGAGAAATGTATGCAGAGACTGGTCTCTTGTTCCCGTATTTCCAGAATTTCTCCCATGAACTTCAACAGCTTGAGGAGTACTGCAAAACCCACAAGTCCAATGCTTCTATGAGTGACATTGTCAACTCTTCTGCCATATCCGAGTATGATTTGGCGGCGGAGGGAGATCTTTTCAAGGCTCCTGAACCTATTATTGAAGAACCATTCATGGACCTGGATCCTGTGGCAGCAGCCATCTCAATGATATCATGTGGGGAAGATGTTGGATCCTCACAGGGACTAAAATCCACTGACATCGATGCTCTTCAAAGCGAGCAACTTCTAAGTGATGTATTCTATGAATGCAAAAAGGATCTTTTAGAGAAGACTGCAATAGAGTCACCACTATGTGAGATTCTGGATATCAAGGTTCCTGTTCTCAATACGGATGAAAGTAAAATTCAAGTAAACAAACAAATTACCGACATGCCATTACCAAAAAGTGTCAGTTTGGGATGTTTGAGCTCAATGGACTGGATGCAAGGAACTGTAATCAAGCCTTCTTTTCTTGAATTCCCAGGAATAGATTTCAACGAGGTTTATGGCATGCGAAGGGCATTTAGCGAAGGCGATATTAAGGCTCTGAGTAATGGCAATGGTAATGTGAACCTGGTCCAATCTTCTCTTGAGAGGCCCCTTGTTATCAGCAACTGCACCAGTGAGGAACGCAGAGAAAAGCTCTCCAGATACAGGAACAAGAAGACGAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTCTGGCCGATAGTCAACCCAGAGTCCGAGGAAGATTCGCGAAAACCGAATAA 873 0.4318 MKFSFLKCVCIGEMYAETGLLFPYFQNFSHELQQLEEYCKTHKSNASMSDIVNSSAISEYDLAAEGDLFKAPEPIIEEPFMDLDPVAAAISMISCGEDVGSSQGLKSTDIDALQSEQLLSDVFYECKKDLLEKTAIESPLCEILDIKVPVLNTDESKIQVNKQITDMPLPKSVSLGCLSSMDWMQGTVIKPSFLEFPGIDFNEVYGMRRAFSEGDIKALSNGNGNVNLVQSSLERPLVISNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKTE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1134 290 Pfam CCT motif 247 289 IPR010402 GO:0005515
Lele27g1134 290 ProSiteProfiles CCT domain profile. 247 289 IPR010402 GO:0005515
Lele27g1134 290 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 192 289 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1134 Lele-ChrLele27 18624590 18629201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1134 223 288 C2C2-CO-like Transcription Factor Family AT5G57660 41.096 1.10e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele27g1134 CCT 5.5e-17 CL0281