Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1116 ATGGACTGCTACCATACTGACTTTGATTTACCAAACTTCGCTTACCCTCATGGCTCCACCTCGTATAACCCTACCTGTCAACATGAAACAATATCGGAGATGTCATCTGTTATGGGCTTAGCTGACATGGCTCTTATGGTCCCACCGCCGCCGCCATATGAAAGCAACGAAGCTTACTCGAACCAGTTCCCGGAACTCGAAAATTTCGACTTTAACTTCTCTGGGTTTGATTACAATGATTTCCCTGCTTTTTATGATGACTTAGTGATCGACGAAAAGCCTCGTACCATTGTTCTTCCTGATCAATCTCAGGGCGAGACTTTTCCGGCTCAGTACGCCCAATCTTCGAGCTCTTTGTTCATTGGAAATGGGTTTGGGTTTGCCCCTTCAGTTAAAGAAGAAGATGAAACTATGGACAGGATTAGCTACAACTGCAGAAAGAAAAGATCAACCAGCTTAGAATTAGATGAGATAAGGAAGTATTTTGATGTTCCCATAACACAAGCTGCGAAAGAACTGAACGTGGGTTTGACACTCCTGAAAAGAAGATGCAGAGAGCTGAATATTACAAGGTGGCCTCATCGGAAGATCAAGAGCTTGAAGGCACTCATCGACAATGTCAAGGAACTGGGTTTGGTGGACGAGGTGGCTATGTTGAAGAAGCATAAGAAGCTCATGGAGAAGTTGCCTGATATGGAATTGAGCGAGGAAACAAAGAAGCTTCGGCAAGCTTGTTTCAAAGCAAATTACCAAAGGAGAAGATCGTTGGCACTTCAAGTCGAGCCCTGA 789 0.4436 MDCYHTDFDLPNFAYPHGSTSYNPTCQHETISEMSSVMGLADMALMVPPPPPYESNEAYSNQFPELENFDFNFSGFDYNDFPAFYDDLVIDEKPRTIVLPDQSQGETFPAQYAQSSSSLFIGNGFGFAPSVKEEDETMDRISYNCRKKRSTSLELDEIRKYFDVPITQAAKELNVGLTLLKRRCRELNITRWPHRKIKSLKALIDNVKELGLVDEVAMLKKHKKLMEKLPDMELSEETKKLRQACFKANYQRRRSLALQVEP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1116 262 Pfam RWP-RK domain 153 200 IPR003035 -
Lele27g1116 262 ProSiteProfiles RWP-RK domain profile. 134 222 IPR003035 -
Lele27g1116 262 PANTHER PROTEIN RKD4 86 257 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1116 Lele-ChrLele27 18482397 18483539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1116 153 257 AtRKD Transcription Factor Family AT5G53040 64.762 6.20e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele27g1116 RWP-RK 1e-22 No_clan